GEO Browser - GEO

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38 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		RDS
GSE154175	A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis [SCATAC_10X]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BED CSV H5 RDS TSV WIG SRA Run Selector	Eneritz Agirre	May 21, 2021
GSE193238	A primed immune transcriptional programme is activated in oligodendroglia in multiple sclerosis [ATAC-Seq and RNA-Seq]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BEDPE H5 RDS TBI TSV WIG	Eneritz Agirre	Jan 28, 2022
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE183765	BlCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	118	BED BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE183766	CaBl: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	171	BED BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE216542	scRNA-seq, snATAC-seq, and spatial transcriptomics analysis of mammary glands of aged female mice	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	22	CSV JPG JSON MTX PNG RDS TIFF TSV TXT XLSX	Olga Anczukow	Sep 29, 2024
GSE157637	Single cell Cut&Tag in the mouse brain	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	17	BW H5 RDS TSV SRA Run Selector	Marek Bartosovic	Feb 10, 2021
GSE198467	Multimodal chromatin profiling using nanobody-based single-cell CUT&Tag	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BW CSV H5SEURAT RDS TSV	Marek Bartosovic	Sep 20, 2022
GSE196987	Durable Alterations of Hematopoiesis and Chromatin post-COVID-19 [MultiomeATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	40	CSV MTX RDS TXT	Jin-Gyu Cheong	Jul 01, 2023
GSE196990	Durable Alterations of Hematopoiesis and Chromatin post-COVID-19	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	189	H5 RDS TXT	Jin-Gyu Cheong	Feb 15, 2023
GSE237987	ARID1A Orchestrates SWI/SNF-mediated Sequential Binding of Transcription Factors and Its Deficiency Drives Pre-memory B-cell Fate and Lymphomagenesis [Arid1a_multiome]	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	14	RDS TBI TSV	Christopher Russell Chin	Feb 02, 2024
GSE240583	Baf155 establishes chromatin priming to promote hematopoietic regeneration and function [single cell multiome - ATAC + GEX]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	ARROW MTX RDS TSV	Changxu Fan	Jul 09, 2024
GSE260504	ATAC-seq of TNF-alpha activation in HEK cells with or without TRAFTAC against NfkB	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BW NARROWPEAK RDS	Pierre-Luc Germain	Mar 04, 2024
GSE230579	Single-mitosis dissection of acute and chronic DNA mutagenesis and repair	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus Mus musculus castaneus	32	RDS	Paul Adrian Ginno	Jan 26, 2024
GSE247130	CEBPA restricts alveolar type 2 cell plasticity during development and injury-repair [1]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BROADPEAK CLOUPE H5 RDS TBI TSV	Dalia Hassan	Apr 18, 2024
GSE264098	CEBPA restricts alveolar type 2 cell plasticity during development and injury-repair [scATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BROADPEAK BW RDS	Dalia Hassan	Apr 16, 2024
GSE247391	Fate-mapping via Spp1-expression history revealed innate immune memory of microglia imprinted by neonatal injury [Spp1Tdt]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	60	BW CSV RDS ZIP	DANYANG HE	Jan 24, 2024
GSE246167	Epigenomic Profile of Lineage-Traced Mouse Horizontal Basal Cells Before and 24 Hours After Injury	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	MTX RDS TSV	Whitney E Heavner	Oct 30, 2023
GSE250589	Distinct transcriptomic and epigenomic responses of mature oligodendrocytes during disease progression in a mouse model of multiple sclerosis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	38	BEDPE BW H5 RDS TBI TSV	Bastien Hervé	Dec 20, 2023
GSE249785	Childhood cancer mutagenesis caused by a domesticated DNA transposase	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	RDS	Claudia L Kleinman	Mar 27, 2024