GEO Browser - GEO

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40 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		RDS
GSE157637	Single cell Cut&Tag in the mouse brain	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	17	BW H5 RDS TSV SRA Run Selector	Marek Bartosovic	Feb 10, 2021
GSE167232	Integration of M. tuberculosis phenotype with single cell RNA-seq to interrogate host macrophage heterogeneity in vivo.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	24	CSV RDS TSV SRA Run Selector	Davide Pisu	Apr 28, 2021
GSE154175	A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis [SCATAC_10X]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BED CSV H5 RDS TSV WIG SRA Run Selector	Eneritz Agirre	May 21, 2021
GSE174226	High-content single-cell combinatorial indexing	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	6	BED CSV RDS TSV TXT SRA Run Selector	Ryan M Mulqueen	May 28, 2021
GSE161374	Addiction-associated genetic variants implicate brain cell type- and region-specific cis-regulatory elements in addiction neurobiology	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	35	BW NARROWPEAK RDS SRA Run Selector	BaDoi Nguyen Phan	Jul 13, 2021
GSE161808	NRF1 Association with AUTS2-Polycomb Mediates Specific Gene Activation in the Brain	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	33	BIGWIG BW NARROWPEAK RDS TXT SRA Run Selector	sanxiong liu	Oct 11, 2021
GSE193238	A primed immune transcriptional programme is activated in oligodendroglia in multiple sclerosis [ATAC-Seq and RNA-Seq]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BEDPE H5 RDS TBI TSV WIG	Eneritz Agirre	Jan 28, 2022
GSE187332	Decay of heterochromatin domains at selective gene loci in aging mouse brain cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	59	RDS TXT SRA Run Selector	Bing Ren	Sep 13, 2022
GSE198467	Multimodal chromatin profiling using nanobody-based single-cell CUT&Tag	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BW CSV H5SEURAT RDS TSV	Marek Bartosovic	Sep 20, 2022
GSE196990	Durable Alterations of Hematopoiesis and Chromatin post-COVID-19	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	189	H5 RDS TXT	Jin-Gyu Cheong	Feb 15, 2023
GSE214845	Dual gene activating and repressive functions of TET1 in germ layer lineage bifurcation distinguished by genomic context and dependence on 5-methylcytosine oxidation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	150	BIGWIG BW MTX NARROWPEAK RDS TSV TXT	Bernard Klaas van der Veer	Apr 12, 2023
GSE196987	Durable Alterations of Hematopoiesis and Chromatin post-COVID-19 [MultiomeATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	40	CSV MTX RDS TXT	Jin-Gyu Cheong	Jul 01, 2023
GSE228660	An atlas of gene regulatory networks for T memory cells in youth and old age [scATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED MTX RDS TSV XLSX	Joseph Wayman	Aug 07, 2023
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE183765	BlCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	118	BED BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE183766	CaBl: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	171	BED BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE245957	txci-ATAC-seq: a massive-scale single-cell technique to profile chromatin accessibility	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	2	RDS TBI TSV TXT	Ryan Mulqueen Mulqueen	Oct 20, 2023
GSE246167	Epigenomic Profile of Lineage-Traced Mouse Horizontal Basal Cells Before and 24 Hours After Injury	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	MTX RDS TSV	Whitney E Heavner	Oct 30, 2023
GSE219015	Deciphering cell states and genealogies of human hematopoiesis with single-cell multi-omics	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	56	H5 RDS TAR TSV TXT	Chen Weng	Nov 18, 2023
GSE250589	Distinct transcriptomic and epigenomic responses of mature oligodendrocytes during disease progression in a mouse model of multiple sclerosis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	56	BEDPE BW CSV H5 RDS TBI TSV	Bastien Hervé	Dec 20, 2023