GEO Browser - GEO

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79 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		BROADPEAK
GSE120393	Polycomb Mediated Chromatin Organization Reveals Transcriptional Silencers Required for Embryonic Development	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	107	BIGWIG BROADPEAK FPKM_TRACKING HIC NARROWPEAK TXT SRA Run Selector	Chia-Lin Wei	Jan 07, 2020
GSE124914	EOMES-dependent epigenetic reprogramming during CD8 T cell development leads to acquisition of memory traits	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	36	BIGWIG BROADPEAK NARROWPEAK	Stanislas Goriely	Jun 06, 2019
GSE140363	Defining the relative and combined contribution of CTCF and CTCFL to genomic regulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	122	BED BEDGRAPH BROADPEAK BW CSV HIC NARROWPEAK SRA Run Selector	Nishana Mayilaadumveettil	Apr 14, 2020
GSE141182	H3K27me3 maintains the transcription program during epigenetic reprogramming in the mouse germ line	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	49	BROADPEAK BW	LMS Bioinformatics Core	Sep 27, 2021
GSE142519	BACH1 Recruits NANOG and Histone H3 Lysine 4 Methyltransferase MLL/SET1 Complexes to Regulate Enhancer-promoter Activity and Maintains Pluripotency	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	23	BED BROADPEAK NARROWPEAK XLSX SRA Run Selector	Siqing Wang	Jan 12, 2021
GSE143474	Non-Canonical Targets of HIF1a Impair Oligodendrocyte Progenitor Cell Function	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	45	BROADPEAK BW NARROWPEAK	Paul Tesar	Oct 20, 2020
GSE145512	STAT5 is a pioneer factor for BATF-mediated plasticity at the Il9 locus [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BROADPEAK SRA Run Selector	Mark H Kaplan	Aug 10, 2020
GSE145541	STAT5 promotes accessibility and is required for BATF-mediated plasticity at the Il9 locus	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	18	BROADPEAK	Mark H Kaplan	Aug 10, 2020
GSE147418	Epigenetic control of cellular cross-talk defines organ fate and function	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	BEDGRAPH BROADPEAK TXT SRA Run Selector	Tae-Hee Kim	Dec 19, 2022
GSE152663	SWI/SNF inactivation in the endometrial epithelium leads to loss of epithelial integrity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	16	BROADPEAK TAB	Ronald L. Chandler	Oct 20, 2020
GSE158196	Differential chromatin binding of the lung lineage transcription factor NKX2-1 resolves opposing murine alveolar cell fates in vivo [scATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED BEDGRAPH BROADPEAK CLOUPE CSV H5 TBI TSV SRA Run Selector	Danielle R. Little	Mar 08, 2021
GSE158205	Differential chromatin binding of the lung lineage transcription factor NKX2-1 resolves opposing murine alveolar cell fates in vivo	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	78	BED BEDGRAPH BROADPEAK CLOUPE CSV H5 NARROWPEAK TBI TSV	Danielle R. Little	Mar 08, 2021
GSE159042	H3K27me3 shapes DNA methylome by inhibiting UHRF1-mediated H3 ubiquitination [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	11	BED BROADPEAK BW SRA Run Selector	Falong Lu	Jun 27, 2022
GSE159043	H3K27me3 shapes DNA methylome by inhibiting UHRF1-mediated H3 ubiquitination	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	23	BED BROADPEAK BW COV	Falong Lu	Jun 27, 2022
GSE160654	The chromatin and regulatory properties of pluripotency-associated poised enhancers are conserved in vivo [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus Mus musculus	12	BEDGRAPH BROADPEAK NARROWPEAK SRA Run Selector	Giuliano Crispatzu	Dec 31, 2020
GSE160657	The chromatin and regulatory properties of pluripotency-associated poised enhancers are conserved in vivo	Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus Mus musculus	28	BED BEDGRAPH BROADPEAK NARROWPEAK TXT	Giuliano Crispatzu	Dec 31, 2020
GSE171749	SETDB1/NSD dependent H3K9me3/H3K36me3 dual heterochromatin maintains gene expression profiles by bookmarking poised enhancers	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	88	BED BROADPEAK BW HIC TXT SRA Run Selector	Amandine BARRAL	Jan 25, 2022
GSE175369	ZFP462 safeguards neural lineage specification by targeting G9A/GLP mediated heterochromatin to silence enhancers	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	134	BROADPEAK BW TXT	Ramesh Yelagandula	Jan 04, 2023
GSE176322	ZFP462 safeguards neural lineage specification by targeting G9A/GLP mediated heterochromatin to silence enhancers [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	BROADPEAK SRA Run Selector	Ramesh Yelagandula	Jan 04, 2023
GSE180356	MTHFD2 inhibition dramatically alters histone methylation landscape in Th17 cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	BROADPEAK SRA Run Selector	John Karijolich	Nov 12, 2021