GEO Browser - GEO

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121 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		WIG
GSE187007	G4access identifies G-quadruplexes and their associations with open chromatin and imprinting control regions. Nat Genet (2023). https://doi.org/10.1038/s41588-023-01437-4	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Saccharomyces cerevisiae Mus musculus Homo sapiens Drosophila melanogaster	63	BED WIG SRA Run Selector	Amal Makrini	Apr 14, 2023
GSE207793	The AT-hook is an evolutionarily conserved auto-regulatory domain of SWI/SNF required for cell lineage priming	Other Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae Mus musculus	100	BW TAB WIG	Junwoo Lee	Jun 01, 2023
GSE64825	Genome-wide distribution and function of ATP-dependent chromatin remodelers in embryonic stem cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	44	BEDGRAPH BW WIG SRA Run Selector	Matthieu GERARD	Jan 26, 2016
GSE70045	Oncogenic deregulation of EZH2 as an opportunity for targeted therapy in lung cancer [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	WIG SRA Run Selector	James Bradner	Nov 01, 2015
GSE70047	Oncogenic deregulation of EZH2 as an opportunity for targeted therapy in lung cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	19	TXT WIG	James Bradner	Nov 01, 2015
GSE72720	CTCF binding polarity determines chromatin looping	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	506	BED WIG	Elzo de Wit	Oct 29, 2015
GSE73865	Genome-wide map of SIX2 and SIX1 binding in human embryonic kidney cortex	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Homo sapiens	21	BED WIG SRA Run Selector	Andrew P McMahon	Jan 31, 2016
GSE73867	Nephron endowment	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Homo sapiens	23	BED TXT WIG	Andrew P McMahon	Jan 31, 2016
GSE74547	ETO Family Protein Mtgr1 Mediates Prdm14 Functions in Stem Cell Maintenance	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	26	TXT WIG SRA Run Selector	Natalie Nady	Jan 01, 2016
GSE77328	OmoMYC blunts promoter invasion by oncogenic MYC to inhibit gene expression characteristic of MYC-dependent tumors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus Homo sapiens	44	TXT WIG SRA Run Selector	Martin Eilers	Oct 18, 2016
GSE78804	Dissection of a super-enhancer in vivo (ChIP-seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	WIG SRA Run Selector	Jim Hughes	Jun 02, 2016
GSE78826	The cohesin associated protein Wapal is required for proper polycomb-mediated gene silencing [Ring1b ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	WIG SRA Run Selector	Sridhar Rao	Mar 21, 2016
GSE78835	Genetic dissection of the α-globin super-enhancer	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	36	WIG	Jim Hughes	Jun 02, 2016
GSE79319	H3K27me3 ChIP-sequencing on LSK (Lin-Sca-1+c-kit+) cells isolated from control, MxCre Jak2VF/+ and MxCre Jak2VF/+ EZH2-/- mice	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	WIG SRA Run Selector	Golam Mohi	Apr 19, 2016
GSE79320	AP-1 and TEAD4 co-operatively promote the vascular program during hemangioblast specification [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	WIG SRA Run Selector	Pierre Daniel Cauchy	Oct 21, 2016
GSE79472	Loss of Ezh2 cooperates with Jak2V617F in the development of myelofibrosis in a mouse model of myeloproliferative neoplasm	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	CEL WIG	Golam Mohi	Apr 19, 2016
GSE80154	Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Mus musculus Homo sapiens	144	BEDGRAPH CEL WIG	James Bradner	Jan 29, 2018
GSE81203	Polarized regulatory landscape and Wnt responsiveness underlie Hox activation in embryos	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	65	BEDGRAPH BW NARROWPEAK WIG SRA Run Selector	Jacqueline Deschamps	Sep 16, 2016
GSE81222	Erasure of Tet-oxidized 5-methylcytosine by a SRAP nuclease	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	31	BED BEDGRAPH BIGWIG TXT WIG SRA Run Selector	Douglas Edmund Feldman	Oct 10, 2017
GSE84052	RAG1 targeting in the genome is dominated by chromatin interactions mediated by the non-core regions of RAG1 and RAG2	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Homo sapiens	4	WIG SRA Run Selector	Yaakov Maman	Jul 06, 2016