GEO Browser - GEO

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812 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		TXT
GSE109262	Joint profiling of chromatin accessibility, DNA methylation and transcription in single cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	synthetic construct Mus musculus	244	TSV TXT SRA Run Selector	Felix Krueger	Jan 17, 2018
GSE157139	CRISPR and biochemical screens identify MAZ as a co-factor in CTCF-mediated insulation at Hox clusters	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	synthetic construct Mus musculus	138	BEDGRAPH BW HIC NARROWPEAK TXT	Danny Reinberg	Feb 06, 2022
GSE215065	Regulation of mouse chamber selective enhancers	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	synthetic construct Mus musculus	82	BW TXT	Xiaoran Zhang	Jan 30, 2023
GSE155658	Postnatal development of Cardiomyocyte	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus rattus Mus musculus	115	BEDGRAPH TXT XLSX SRA Run Selector	Li Wang	May 29, 2022
GSE101918	Species and Cell-Type Properties of Classically Defined Human and Rodent Neurons and Glia	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Rattus norvegicus Mus musculus Homo sapiens	114	TDF TXT	Xiao Xu	Oct 12, 2018
GSE165655	Histone modification profile in animal models of neurodevelopmental disorders treated with TAK-418	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus Mus musculus	74	TXT SRA Run Selector	Satoru Matsuda	Jan 29, 2021
GSE226502	Epigenetic evolution of the Ly49 gene family	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Rattus norvegicus Mus musculus	65	BEDGRAPH BW CSV FA HIC TXT	Changxu Fan	Apr 20, 2024
GSE111930	An endogenous retrovirus-derived long non-coding RNA promotes fetal cardiomyocyte migration in primates	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Pan troglodytes Mus musculus Macaca mulatta Homo sapiens Gorilla gorilla	60	BW HIC TDF TXT SRA Run Selector	Lei Tian	Aug 11, 2020
GSE59176	Prevalent p53 gain-of-function mutants co-opt epigenetic pathways to drive cancer growth	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus Homo sapiens	15	BEDGRAPH BW TXT SRA Run Selector	Morgan Sammons	Jul 31, 2015
GSE61673	Nkx2.2, Nkx6.1, Olig2, and Gli3 genomic binding regions in neural progenitors [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	13	BED TXT SRA Run Selector	Yuichi Nishi	Aug 24, 2015
GSE67955	The landscape of global-long range interactions in mouse and human blood cell lines mediated by Yy1, GATA1, and CTCF during differentiation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	18	BED TXT SRA Run Selector	Marissa Macchietto	Apr 30, 2019
GSE68617	Trim33 binds and silences a class of young endogenous retroviruses in the mouse testis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BW TXT SRA Run Selector	Luke Thomas Isbel	Nov 06, 2015
GSE70047	Oncogenic deregulation of EZH2 as an opportunity for targeted therapy in lung cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	19	TXT WIG	James Bradner	Nov 01, 2015
GSE70110	DDX5 and its associated lncRNA Rmrp modulate Th17 cell effector functions	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	TXT	Wendy Huang	Dec 21, 2015
GSE70766	Distinct processes and transcriptional targets underlie CDX2 requirements in intestinal stem cells and differentiated villus cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	BED BW GTF TXT SRA Run Selector	Ramesh Shivdasani	Sep 15, 2015
GSE70960	Pancreatic Beta-Cell Enhancers Regulate Rhythmic Transcription of Exocyst Triggering and Diabetes [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	TXT SRA Run Selector	Mark Perelis	Nov 10, 2015
GSE70961	Pancreatic Beta Cell Enhancers Regulate Rhythmic Transcription of Exocyst Triggering and Diabetes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Homo sapiens	68	TXT	Mark Perelis	Nov 10, 2015
GSE71156	Allele-specific ATAC-seq	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BW NARROWPEAK TXT SRA Run Selector	Howard Chang	Jun 30, 2016
GSE71218	How C/EBPa creates an elite cell state for reprogramming to pluripotency	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	68	BW TXT	samuel Collombet	Feb 19, 2016
GSE71708	Mammalian Heat Shock Response And Mechanisms Underlying Its Genome-wide Transcriptional Regulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	33	BIGWIG TXT SRA Run Selector	Dig Bijay Mahat	Mar 01, 2016