GEO Browser - GEO

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819 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		TXT
GSE205783	Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	170	BEDGRAPH BIGWIG COOL NARROWPEAK TXT	Lucille Lopez-Delisle	Apr 28, 2023
GSE185619	2cChIP-seq: an efficient and reliable method for epigenomic profiling of small cell numbers and single cells	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	231	BW TXT	Xiaodong Zhao	Oct 27, 2024
GSE227750	3D genome organization coordinates key regulators of lineage specification in mammary epithelial cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	150	BW MTX TXT	Yunshun Chen	Sep 08, 2023
GSE244952	3D genome organization during TGFB-induced transcription requires nuclear microRNA and G-quadruplexes	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	25	BW TXT XLS XLSX	Guillermo Barreto	Sep 27, 2024
GSE244950	3D genome organization during TGFB-induced transcription requires nuclear microRNA and G-quadruplexes [HICHIP_seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	TXT	Guillermo Barreto	Sep 27, 2024
GSE184600	4DNESOUYRIO9 - sci-ATAC-seq on mESCs differentiated to embryoid body	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	TXT SRA Run Selector	4DN DCIC	Sep 24, 2021
GSE166423	5-hydroxymethylcytosine is required for terminal differentiation of Purkinje neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	42	TXT SRA Run Selector	Elitsa Stoyanova	Sep 01, 2021
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE207563	A Bipartate function of ESRRB integrates signaling over time to balance self-renewal and differentiation [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BED BW TXT	Josh M Brickman	Apr 18, 2023
GSE207562	A Bipartate function of ESRRB integrates signaling over time to balance self-renewal and differentiation [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BED BW TXT	Josh M Brickman	Apr 18, 2023
GSE120063	A CHAF1B-dependent molecular switch in hematopoiesis and leukemia pathogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	50	TXT SRA Run Selector	Elizabeth Thomas Bartom	Nov 12, 2018
GSE167487	A Variant in Human AIOLOS Impairs Adaptive Immunity by Interfering with IKAROS	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	26	BEDGRAPH NARROWPEAK TXT SRA Run Selector	Motoi Yamashita	May 01, 2021
GSE124596	A conserved noncoding locus modulates random monoallelic Xist expression across a TAD boundary	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	56	BED BEDGRAPH BW CSV TXT SRA Run Selector	Nicolas Servant	Dec 01, 2019
GSE125972	A distal super enhancer mediates estrogen-dependent mouse uterine–specific gene transcription of Insulin-like growth factor 1 (Igf1)	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	38	BIGWIG HIC TXT SRA Run Selector	Sylvia C Hewitt	May 08, 2019
GSE233055	A gene regulatory network of the endothelial-to-hematopoietic transition [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	35	TXT	Marella de Bruijn	Jun 30, 2024
GSE129846	A genome-wide CRISPR screen reveals a role for the non-canonical nucleosome remodeling BAF complex in Foxp3 expression and regulatory T cell function	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	99	BED TXT SRA Run Selector	Diana C. Hargreaves	Jul 07, 2020
GSE154582	A genome-wide exploration of the targets of the transcription factors FOXL2 and ESR2 unveils their implication in cell migration, invasion and adhesion	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	19	BIGWIG TXT	Anne Laure Todeschini	Mar 24, 2021
GSE118731	A genome-wide view of the de-differentiation of central nervous system endothelial cells in culture	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30	BW NARROWPEAK TXT SRA Run Selector	Mark F Sabbagh	Jan 07, 2020
GSE143711	A hotspot mutation p.L162R in IKZF3 drives leukemogenesis via transcriptional dysregulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30	BIGWIG BW TXT SRA Run Selector	Catherine Wu	Dec 01, 2020
GSE278914	A lineage-specific nascent RNA assay unveils principles of gene regulation in tissue biology.	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	49	BW TXT	Tudorita Tumbar	Dec 04, 2024