GEO Browser - GEO

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41 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		TAR
GSE254090	A cell type-aware framework for nominating non-coding variants in Mendelian regulatory disorders	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	87	BIGWIG BW RESULTS TAR	Elizabeth C Engle	Aug 06, 2024
GSE171919	A conserved YAP/Notch/REST network controls the neuroendocrine cell fate in the lungs	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	75	TAR	Julien Sage	Feb 07, 2022
GSE239603	APOE4 impairs the microglial response in Alzheimer's disease by inducing TGFbeta-mediated checkpoints	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	274	BW TAR	Rayk Behrendt	Jul 31, 2023
GSE190286	Aged intestinal stem cells propagate cell-intrinsic sources of inflammaging in mice	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	86	TAR	Erica Valentini	Oct 26, 2023
GSE207997	Analysis of Polycomb Repressive Complex 1 subunits across cell cycle in pluripotent cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	53	BEDGRAPH BIGWIG TAR	Jordi Martorell-Marugan	Dec 02, 2022
GSE272483	CTCF-dependent insulation of Hoxb13 and the heterochronic control of tail length	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Third-party reanalysis	Mus musculus	54	BW NARROWPEAK TAR	Lucille Lopez-Delisle	Jul 18, 2024
GSE247511	Cadherins modulate the self-organizing potential of gastruloids	Expression profiling by high throughput sequencing Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	83	BW LOOM NARROWPEAK TAR	ALEXANDRE MAYRAN	Jul 18, 2024
GSE84795	Characterization of hundreds of regulatory landscapes in developing limbs reveals two regimes of chromatin folding	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	114	BW TAR	Guillaume Andrey	Dec 06, 2016
GSE141813	Combined mutation of C/EBPa and GATA-2 induce bi-lineage acute erythroid leukemia through transformation of a neomorphic neutrophil-erythroid progenitor	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	74	TAR	Cristina Di Genua	Feb 24, 2020
GSE148746	Concurrent stem- and lineage-affiliated chromatin programs precede hematopoietic lineage restriction	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	11	TAR SRA Run Selector	Göran Karlsson	May 02, 2022
GSE207482	Eribulin induces mesenchymal-epithelial transition to curtail metastatic progression by altering the chromatin landscape of breast cancers cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	TAR TXT	Mohamed Ashick Mohamed Saleem	Aug 02, 2023
GSE207595	Eribulin induces mesenchymal-epithelial transition to curtail metastatic progression by altering the chromatin landscape of breast cancers cells [scATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	CSV TAR TXT	Mohamed Ashick Mohamed Saleem	Aug 02, 2023
GSE193463	HMGNs Regulate White Adipocyte Browning By Stabilizing Cell Identity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	102	NARROWPEAK TAR	Michael Bustin	Oct 19, 2022
GSE171220	Hematopoiesis under telomeric attrition at the single-cell resolution [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	4	TAR SRA Run Selector	Feiyang Ma	Oct 23, 2021
GSE193119	Histone methyltransferase DOT1L regulates macrophage lipid biosynthesis and inflammatory responses and affects atherosclerotic plaque stability	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	41	BW TAR	Lisa Willemsen	Oct 04, 2022
GSE266424	IRF8 defines the epigenetic landscape in postnatal microglia, thereby directing their transcriptome programs - additional datasets	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	39	H5 NARROWPEAK TAB TAR TBI TSV	Keita Saeki	Jul 01, 2024
GSE99607	Impaired DNA demethylation of C/EBP sites causes premature aging	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array Other	Mus musculus	58	BW TAR TSV TXT	Emil Karaulanov	Jun 11, 2018
GSE140008	Induction of Pluripotent Stem Cells from Mouse Embryonic Fibroblasts by Jdp2, Glis1, Essrb and Sall4	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	23	BW TAR TXT	Jing Liu	Nov 05, 2022
GSE221074	Klf6 is required in thymic epithelial cells for normal thymus development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	H5 TAR	Yongge Zhao	Oct 12, 2023
GSE221073	Klf6 is required in thymic epithelial cells for normal thymus development [scATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	TAR	Yongge Zhao	Oct 12, 2023