GEO Browser - GEO

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322 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		NARROWPEAK
GSE275784	Synchronization of growth and self-organizing digit pattern by WNT signaling	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	42	BW NARROWPEAK	Lucille Lopez-Delisle	Aug 28, 2024
GSE275782	Synchronization of growth and self-organizing digit pattern by WNT signaling [ChIPseq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BW NARROWPEAK	Lucille Lopez-Delisle	Aug 30, 2024
GSE272483	CTCF-dependent insulation of Hoxb13 and the heterochronic control of tail length	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Third-party reanalysis	Mus musculus	54	BW NARROWPEAK TAR	Lucille Lopez-Delisle	Jul 18, 2024
GSE272382	CTCF-dependent insulation of Hoxb13 and the heterochronic control of tail length [ChIPM]	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Mus musculus	4	BW NARROWPEAK	Lucille Lopez-Delisle	Jul 18, 2024
GSE272379	CTCF-dependent insulation of Hoxb13 and the heterochronic control of tail length [CUT&RUN]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BW NARROWPEAK	Lucille Lopez-Delisle	Jul 18, 2024
GSE271328	MYBL2 drives prostate cancer plasticity and identifies CDK2 as a therapeutic vulnerability in RB1-loss and neuroendocrine prostate cancer [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	NARROWPEAK	Kun-Lin Ho	Jul 30, 2024
GSE271327	MYBL2 drives prostate cancer plasticity and identifies CDK2 as a therapeutic vulnerability in RB1-loss and neuroendocrine prostate cancer [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	NARROWPEAK	Kun-Lin Ho	Jul 30, 2024
GSE271007	Stem cells tightly regulate dead cell clearance to maintain tissue fitness	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1093	NARROWPEAK	Katherine Stewart	Jun 28, 2024
GSE271006	Stem cells tightly regulate dead cell clearance to maintain tissue fitness [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	34	BW NARROWPEAK	Katherine Stewart	Jun 28, 2024
GSE267952	Organoid Culture Promotes Dedifferentiation of Mouse Myoblasts into Stem Cells Capable of Complete Muscle Regeneration	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BW NARROWPEAK	Kristina M Holton	Jun 28, 2024
GSE266424	IRF8 defines the epigenetic landscape in postnatal microglia, thereby directing their transcriptome programs - additional datasets	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	39	H5 NARROWPEAK TAB TAR TBI TSV	Keita Saeki	Jul 01, 2024
GSE262348	NEMO Knockout Drives Variations in Gene Expression Regenerative Trajectory and Induces Chromatin Remodeling in murine muscle satellite cells during healing from traumatic injury	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	BIGWIG NARROWPEAK TSV TXT	Carlos Aguilar	Apr 01, 2024
GSE260811	Cooperative super-enhancer inactivation caused by heterozygous loss of CREBBP and KMT2D skews B-cell fate decisions and accelerates development of T-cell depleted lymphomas [Mint-ChIP]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BROADPEAK BW NARROWPEAK	Christopher Russell Chin	Mar 05, 2024
GSE256500	Obesity-disrupted H3K4me3 in hematopoietic stem progentior cells in mice	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	BIGWIG NARROWPEAK	Pluto Biosciences	Mar 07, 2024
GSE255587	Control of neuronal excitation-inhibition balance by BMP-SMAD1 signaling [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	NARROWPEAK	Peter Scheiffele	Feb 16, 2024
GSE254503	The longitudinal kinetics of AAV5 vector integration profiles and evaluation of clonal expansion in mice	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	64	NARROWPEAK	Evan Witt	Feb 01, 2024
GSE252482	Synthetic reversed sequences reveal default genomic states	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus Saccharomyces cerevisiae	160	BW NARROWPEAK	Brendan R. Camellato	Jan 16, 2024
GSE250267	EVOLUTIONARY CO-OPTION OF AN ANCESTRAL CLOACAL REGULATORY LANDSCAPE WITH THE EMERGENCE OF DIGITS AND GENITALS	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Danio rerio Mus musculus	34	BED BW COOL NARROWPEAK TXT	Aurelie Hintermann	Apr 17, 2024
GSE250263	EVOLUTIONARY CO-OPTION OF AN ANCESTRAL CLOACAL REGULATORY LANDSCAPE WITH THE EMERGENCE OF DIGITS AND GENITALS [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Danio rerio Mus musculus	14	BW NARROWPEAK	Aurelie Hintermann	Apr 17, 2024
GSE249781	Sox9 switch links regeneration to fibrosis at the single-cell level in mammalian kidneys	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	41	BIGWIG H5 NARROWPEAK TBI TSV	AGCT Core	Feb 26, 2024