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12 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus			COOL
GSE98671	Targeted degradation of CTCF decouples local insulation of chromosome domains from genomic compartmentalization	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	102		BED BW COOL FASTA TXT SRA Run Selector	Elphege Nora	May 25, 2017
GSE156868	Molecular basis of CTCF binding polarity in genome folding	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	161		BED COOL FASTA TXT SRA Run Selector	Elphege Nora	Aug 30, 2020
GSE194114	Context-dependent enhancer function revealed by targeted inter-TAD relocation	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	34		BED BW COOL NARROWPEAK TXT	Lucille Lopez-Delisle	May 17, 2022
GSE195592	Developmental and evolutionary comparative analysis of a HoxD regulatory landscape in mammals and birds	Genome binding/occupancy profiling by high throughput sequencing Other	Gallus gallus Mus musculus	46		BED BEDGRAPH BIGWIG BW COOL NARROWPEAK TXT	Aurelie Hintermann	Jun 20, 2022
GSE250267	EVOLUTIONARY CO-OPTION OF AN ANCESTRAL CLOACAL REGULATORY LANDSCAPE WITH THE EMERGENCE OF DIGITS AND GENITALS	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Danio rerio Mus musculus	34		BED BW COOL NARROWPEAK TXT	Aurelie Hintermann	Apr 17, 2024
GSE205783	Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	170		BEDGRAPH BIGWIG COOL NARROWPEAK TXT	Lucille Lopez-Delisle	Apr 28, 2023
GSE165495	Mesomelic Dysplasias Associated With The HOXD Locus Are Caused By Regulatory Reallocations	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing Third-party reanalysis	Mus musculus	23		BW COOL NARROWPEAK TAR TXT	Lucille Lopez-Delisle	Jul 20, 2021
GSE168251	CTCF and transcription orchestrate chromatin structure re-configuration after mitosis	Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	44		BW COOL NARROWPEAK	Yemin Lan	Jun 17, 2021
GSE181387	Cumulative in-cis mutagenesis in vivo reveals various functions for CTCF sites at the mouse Hoxd cluster	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	86		BW COOL NARROWPEAK TXT	Lucille Lopez-Delisle	Oct 05, 2021
GSE208298	Prmt5-dependent regulation of gene expression and TAD boundary strength during early adipogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	20		BW COOL	Sabriya Syed	Sep 08, 2023
GSE228402	Selective compartmentalization in condensin-depleted mitotic chromosomes	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	146		BW COOL HIC	Haoyue Zhang	Nov 22, 2023
GSE205780	Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos [HiChIP]	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	1		COOL	Lucille Lopez-Delisle	Apr 28, 2023