GEO Browser - GEO

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206 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		BEDGRAPH
GSE112110	Genome wide map of DMC1 in testis of Stag3-/-, Rec8-/- and Stag3-/-Rec8-/- mice.	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	BED BEDGRAPH TXT SRA Run Selector	Mary Ann Handel	Mar 07, 2019
GSE144144	Sexual dimorphism in the meiotic requirement for PRDM9: a mammalian evolutionary safeguard	Third-party reanalysis Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BED BEDGRAPH TXT SRA Run Selector	Natalie R Powers	Oct 23, 2020
GSE72164	Dynamic reorganization of extremely long-range promoter-promoter interactions between two states of pluripotency	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	76	BEDGRAPH BEDPE BW TXT SRA Run Selector	Shuang-Yin Wang	Dec 07, 2015
GSE80154	Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array	Homo sapiens Mus musculus	144	BEDGRAPH CEL WIG	James Bradner	Jan 29, 2018
GSE81203	Polarized regulatory landscape and Wnt responsiveness underlie Hox activation in embryos	Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	65	BEDGRAPH BW NARROWPEAK WIG SRA Run Selector	Jacqueline Deschamps	Sep 16, 2016
GSE83293	A hyperactive transcriptional state marks genome reactivation at the mitosis-G1 transition	Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	77	BEDGRAPH BIGWIG BW	Ross Hardison	Jun 15, 2016
GSE89520	Lamins organize the three dimensional genome from nuclear periphery in ES cells	Other Non-coding RNA profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	40	BEDGRAPH TXT SRA Run Selector	Yixian Zheng	Nov 01, 2017
GSE90017	Transcriptional and cistromic profiling of mouse nephron progenitor cells	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	42	BEDGRAPH BW TXT	Andrew P McMahon	Jan 17, 2018
GSE90034	Srf destabilizes cell identity	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array	Mus musculus	41	BEDGRAPH BW CEL TXT	Takashi Ikeda	Apr 18, 2018
GSE90561	Sox2 is required for functional chromatin connectivity in brain-derived neural stem cells.	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	65	BED BEDGRAPH BEDPE TXT	Federico Zambelli	Mar 07, 2019
GSE92412	Epigenetic modulation of a hardwired 3D chromatin landscape in two naive states of pluripotency.	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	194	BEDGRAPH BIGWIG BW	Hendrik G Stunnenberg	Apr 30, 2019
GSE92434	RNA- and ATAC-seq data of Wt, Ebf1-KO and Pax5-KO FL-ProB-cells.	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	18	BEDGRAPH TXT SRA Run Selector	Mikael Sigvardsson	Jun 08, 2018
GSE94431	Capturing the onset of PRC2-mediated repressive domain formation	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	107	BEDGRAPH BW	Danny Reinberg	Jun 21, 2018
GSE94716	Krox20 hindbrain regulation involves multiple modes of cooperation between cis-acting elements	Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	71	BEDGRAPH BIGWIG BW	Pascale Gilardi-Hebenstreit	Jul 18, 2017
GSE96611	Interplay between genome topology and gene regulation during somatic cell reprogramming	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	57	BEDGRAPH BW TSV	Thomas Graf	Jan 30, 2018
GSE97148	Clonally stable Vκ allelic choice instructs Igκ repertoire	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	32	BEDGRAPH TXT SRA Run Selector	Yehudit Bergman	Apr 01, 2017
GSE98063	Mll3 and Mll4 facilitate enhancer RNA synthesis and transcriptional elongation from promoters independently of H3K4 monomethylation	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	48	BEDGRAPH BW CSV SRA Run Selector	Kristel Dorighi	May 05, 2017
GSE98119	The energetics and physiological impact of cohesin extrusion	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	352	BED BEDGRAPH BW HIC NARROWPEAK TXT SRA Run Selector	Seolkyoung Jung	May 01, 2018
GSE98140	SET1A/COMPASS and shadow enhancers in the regulation of homeotic gene expression	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	193	BEDGRAPH BW SRA Run Selector	Ali Shilatifard	May 09, 2017
GSE112957	Parvovirus Minute Virus of Mice Localizes to Sites of Cellular DNA Damage to Establish and Amplify its Lytic Infection	Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	23	BED BEDGRAPH SRA Run Selector	Kinjal Majumder	Jul 25, 2018