GEO Browser - GEO

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208 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		BEDGRAPH
GSE157139	CRISPR and biochemical screens identify MAZ as a co-factor in CTCF-mediated insulation at Hox clusters	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	synthetic construct Mus musculus	138	BEDGRAPH BW HIC NARROWPEAK TXT	Danny Reinberg	Feb 06, 2022
GSE216095	Targeting MYC effector functions in pancreatic cancer by inhibiting the ATPase RUVBL1/2	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	synthetic construct Mus musculus	87	BEDGRAPH	Elmar Wolf	Jun 01, 2024
GSE155658	Postnatal development of Cardiomyocyte	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus rattus Mus musculus	115	BEDGRAPH TXT XLSX SRA Run Selector	Li Wang	May 29, 2022
GSE226502	Epigenetic evolution of the Ly49 gene family	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Rattus norvegicus Mus musculus	65	BEDGRAPH BW CSV FA HIC TXT	Changxu Fan	Apr 20, 2024
GSE59176	Prevalent p53 gain-of-function mutants co-opt epigenetic pathways to drive cancer growth	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus Homo sapiens	15	BEDGRAPH BW TXT SRA Run Selector	Morgan Sammons	Jul 31, 2015
GSE64825	Genome-wide distribution and function of ATP-dependent chromatin remodelers in embryonic stem cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	44	BEDGRAPH BW WIG SRA Run Selector	Matthieu GERARD	Jan 26, 2016
GSE72084	Characterization of chromatin and gene expression changes during fasting in mouse liver [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	38	BEDGRAPH CSV SRA Run Selector	Songjoon Baek	Dec 20, 2016
GSE72087	Characterization of chromatin and gene expression changes during fasting in mouse liver	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	50	BEDGRAPH CSV FPKM_TRACKING	Songjoon Baek	Dec 20, 2016
GSE72164	Dynamic reorganization of extremely long-range promoter-promoter interactions between two states of pluripotency	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	76	BEDGRAPH BEDPE BW TXT SRA Run Selector	Shuang-Yin Wang	Dec 07, 2015
GSE72853	Intragenic DNA methylation prevents cryptic transcription initiations on gene bodies [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	25	BEDGRAPH SRA Run Selector	Francesco Neri	Feb 25, 2017
GSE72856	Intragenic DNA methylation prevents cryptic transcription initiations on gene bodies	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	78	BED BEDGRAPH	Francesco Neri	Feb 25, 2017
GSE76934	Reversible transitions between transformed and differentiated states in AML	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	53	BED BEDGRAPH TXT	Ruijie Liu	May 13, 2019
GSE79520	The dual role of LSD1 and HDAC3 in STAT5-dependent transcription is determined by protein interactions, binding affinities, motifs and genomic positions.	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	40	BED BEDGRAPH TXT	Aikaterini Nanou	Nov 30, 2016
GSE80154	Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Mus musculus Homo sapiens	144	BEDGRAPH CEL WIG	James Bradner	Jan 29, 2018
GSE81203	Polarized regulatory landscape and Wnt responsiveness underlie Hox activation in embryos	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	65	BEDGRAPH BW NARROWPEAK WIG SRA Run Selector	Jacqueline Deschamps	Sep 16, 2016
GSE81222	Erasure of Tet-oxidized 5-methylcytosine by a SRAP nuclease	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	31	BED BEDGRAPH BIGWIG TXT WIG SRA Run Selector	Douglas Edmund Feldman	Oct 10, 2017
GSE82199	LTR-retrotransposon control by tRNA-derived small RNA	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus Homo sapiens	54	BEDGRAPH TXT SRA Run Selector	Robert A Martienssen	Jun 29, 2017
GSE83293	A hyperactive transcriptional state marks genome reactivation at the mitosis-G1 transition	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	77	BEDGRAPH BIGWIG BW	Ross Hardison	Jun 15, 2016
GSE83833	Genome-wide characterization of histone mark co-occurrence at single molecule resolution	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	310	BEDGRAPH BIGWIG SRA Run Selector	Ido Amit	Jul 13, 2016
GSE85505	KAT–independent gene regulation by Tip60 promotes ESC self-renewal but not pluripotency	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	48	BEDGRAPH SRA Run Selector	Thomas Fazzio	Apr 06, 2017