578 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterPlatform: GPL19057 Remove filterGenome binding/occupancy profiling by high throughput sequencing Remove filterMus musculus Remove filterBED
GSE199431
Position-dependent function of human sequence-specific transcription factors
56 Christopher Benner Apr 26, 2024
GSE250267
EVOLUTIONARY CO-OPTION OF AN ANCESTRAL CLOACAL REGULATORY LANDSCAPE WITH THE EMERGENCE OF DIGITS AND GENITALS
34 Aurelie Hintermann Apr 17, 2024
GSE187007
G4access identifies G-quadruplexes and their associations with open chromatin and imprinting control regions. Nat Genet (2023). https://doi.org/10.1038/s41588-023-01437-4
63 Amal Makrini Apr 14, 2023
GSE199801
A CpG island-encoded mechanism protects genes from premature transcription termination [SET1_ChIPseq]
  • Genome binding/occupancy profiling by high throughput sequencing
60 Emilia Dimitrova Dec 22, 2022
GSE128818
Aberrant phase separation of transcription factors in human developmental disorders
19 Denes Hnisz May 07, 2020
GSE195592
Developmental and evolutionary comparative analysis of a HoxD regulatory landscape in mammals and birds
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
46 Aurelie Hintermann Jun 20, 2022
GSE203031
Developmental and evolutionary comparative analysis of a HoxD regulatory landscape in mammals and birds [ATAC-Seq]
  • Genome binding/occupancy profiling by high throughput sequencing
12 Aurelie Hintermann Jun 20, 2022
GSE65360
Single-cell chromatin accessibility data using scATAC-seq
  • Genome binding/occupancy profiling by high throughput sequencing
1632 Jason Daniel Buenrostro Jun 17, 2015
GSE73865
Genome-wide map of SIX2 and SIX1 binding in human embryonic kidney cortex
  • Genome binding/occupancy profiling by high throughput sequencing
21 Andrew P McMahon Jan 31, 2016
GSE73867
Nephron endowment
23 Andrew P McMahon Jan 31, 2016
GSE86912
Quantitative Proteomic and Transcriptomic Analysis Reveals Post-Transcriptional Regulation of Mitochondrial Biogenesis during Erythropoiesis
32 Jian Xu May 15, 2017
GSE88817
In situ CAPTURE of chromatin interactions by biotinylated dCas9
175 Jian Xu Aug 24, 2017
GSE89416
ATAC-seq analysis in 5F cells and AGM cells with EZH1 depletion
  • Genome binding/occupancy profiling by high throughput sequencing
7 Melissa Kinney Jan 01, 2018
GSE89418
EZH1 as a key epigenetic barrier to definitive haematopoiesis during embryonic development
58 Melissa Kinney Jan 01, 2018
GSE98119
The energetics and physiological impact of cohesin extrusion
352 Seolkyoung Jung May 01, 2018
GSE98843
Epigenome analysis reveals novel aspects of ILC2 activation and supports a pathogenic role in asthma
15 Ralph Stadhouders Mar 14, 2018
GSE99173
ATAC-seq analysis in K562 cells with or without HBD-1k region knockout, mouse KH2 embryonic stem cells (ESCs) and differentiated KH2 Embryoid bodies (EBs)
  • Genome binding/occupancy profiling by high throughput sequencing
14 Jian Xu Aug 24, 2017
GSE99177
ChIP-seq analysis of dCas9 chromatin occupancy by dCas9/sgRNA-mediated CAPTURE
  • Genome binding/occupancy profiling by high throughput sequencing
61 Jian Xu Aug 24, 2017
GSE99178
ChIP-seq analysis of BRD4 and RNAPII in K562 cells treated with DMSO or JQ1, NUP98 and NUP153 in K562 cells, and H3K27ac in mouse KH2 undifferentiated embryonic stem cells (ESCs) or differentiated embryonic bodies (EBs)
  • Genome binding/occupancy profiling by high throughput sequencing
11 Jian Xu Aug 24, 2017
GSE103602
Genome-wide H3K4me3 and gene expression before and after methionine restriction in human cancer cells and mouse liver
28 Jason W Locasale Jan 01, 2018