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67 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL16417	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		TXT
GSE140975	Wapl repression by Pax5 promotes loop extrusion and V gene recombination at the Igh locus	Other Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	170	BED BEDGRAPH BW HIC TXT SRA Run Selector	Meinrad Busslinger	Jul 01, 2020
GSE135841	Epigenetic priming by Dppa2/4 in pluripotency facilitates multi-lineage commitment	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	189	TXT XLSX SRA Run Selector	Steven William Wingett	Jun 23, 2020
GSE142781	CTCF orchestrates long-range cohesin-driven V(D)J recombinational scanning	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	170	BEDGRAPH BROADPEAK BW TXT	Frederick W Alt	May 11, 2020
GSE131690	H3K36 methyltransferase SETD2 regulates NHEJ during lymphoid and neural development	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	68	BW TXT	Richard Koche	Mar 23, 2020
GSE142289	Induction of Recurrent Break Cluster Genes in Neural Progenitor Cells Differentiated from Embryonic Stem Cells In Culture [HTGTS-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	104	TXT SRA Run Selector	Frederick W Alt	Jan 13, 2020
GSE120393	Polycomb Mediated Chromatin Organization Reveals Transcriptional Silencers Required for Embryonic Development	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	107	BIGWIG BROADPEAK FPKM_TRACKING HIC NARROWPEAK TXT SRA Run Selector	Chia-Lin Wei	Jan 07, 2020
GSE124596	A conserved noncoding locus modulates random monoallelic Xist expression across a TAD boundary	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	56	BED BEDGRAPH BW CSV TXT SRA Run Selector	Nicolas Servant	Dec 01, 2019
GSE134303	The intestinal microbiota programs diurnal rhythms in host metabolism through histone deacetylase 3	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	70	TXT SRA Run Selector	Zheng Kuang	Sep 26, 2019
GSE130270	Chromatin Loop Extrusion Plays a Fundamental Mechanistic Role in Antibody Class Switching	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	149	BEDGRAPH BROADPEAK BW TXT	Frederick W Alt	Sep 25, 2019
GSE121118	Expression profile (nanoCAGE-seq), chromatin accessibility (ATAC-seq) profile, and histone modification profile (ChIP-seq for H3K4me3, H3K9me3, and H3K27me3) during the course of mouse gonocyte development	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	56	H5 TXT WIG SRA Run Selector	Haruhiko Siomi	Aug 29, 2019
GSE130224	The Fundamental Role of Chromatin Loop Extrusion in Physiological V(D)J Recombination	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Genome variation profiling by high throughput sequencing	Mus musculus	133	BED BEDGRAPH BEDPE BW HIC TXT	Frederick W Alt	Aug 19, 2019
GSE121355	A pliable mediator acts as a functional, rather than an architectural bridge, between promoters and enhancers	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	201	BEDGRAPH BW HIC TXT SRA Run Selector	Seolkyoung Jung	Aug 01, 2019
GSE126558	CREB mediates transient and sustained genomic responses to cAMP via distinct mechanisms	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus Rattus norvegicus	129	TXT	Sam Van de Velde	Jun 16, 2019
GSE129529	Topoisomerase II-induced Chromosome Breakage and Translocation Is Determined by Chromosome Architecture and Transcriptional Activity	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	73	BW TXT	Yaakov Maman	Apr 24, 2019
GSE122450	Parkinson-associated SNCA enhancer variants revealed by open chromatin in mouse dopamine neurons	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	15	TXT SRA Run Selector	Andy McCallion	Nov 14, 2018
GSE104811	Genome-wide mapping of H3K79me2 in EPZ5676-treated lymphatic endothelial cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	6	BIGWIG TXT	Chanhyeok Park	Oct 10, 2018
GSE103543	Internally Calibrated ChIP-seq (ICeChIP-seq) using a large panel of antibodies against H3K4 methylations to measure genome-wide histone modification density in mammalian cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	25	BED BEDGRAPH BIGWIG FA TXT SRA Run Selector	Rohan Nishant Shah	Sep 20, 2018
GSE97669	Promoter of lncRNA gene PVT1 is a tumor suppressor DNA element	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	267	BW NARROWPEAK TXT	Howard Y. Chang	May 31, 2018
GSE110603	Characterization of tissue-specific BMAL1 cistromes reveals new roles for enhancer-enhancer interactions in regulating rhythmic transcription [ChIA-PET]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	TXT SRA Run Selector	Jerome Menet	May 08, 2018
GSE104389	Genome-wide analysis of the histone variant H3mm7	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	117	BW TXT	Yasuyuki Ohkawa	Feb 27, 2018