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17 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Mus musculus					Oct 31, 2023
GSE229169	Comparative single cell epigenomic analysis of gene regulatory programs in the rodent and primate motor cortex	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Callithrix jacchus Homo sapiens Macaca mulatta Mus musculus	46		MTX TSV	Bing Ren	Oct 31, 2023
GSE203322	BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	60		BIGWIG BW MTX RESULTS TSV TXT	Masaki Nomura	Oct 31, 2023
GSE210815	Outward-oriented sites within clustered CTCF boundaries are key for intraTAD chromatin interactions and gene regulation [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	147		BEDGRAPH TXT WIG	Xiao Ge	Oct 31, 2023
GSE210817	Outward-oriented sites within clustered CTCF boundaries are key for intraTAD chromatin interactions and gene regulation	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	571		BEDGRAPH FPKM_TRACKING WIG	Xiao Ge	Oct 31, 2023
GSE236960	BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	10		BW TXT	Weijia Zang	Oct 31, 2023
GSE185642	Integrative multi-omic profiling of adult mouse brain endothelial cells and potential implications in Alzheimer’s disease	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	21		TXT SRA Run Selector	Yage Nie	Oct 31, 2023
GSE203315	BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state [ATAC-Seq I]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2		BIGWIG	Masaki Nomura	Oct 31, 2023
GSE203317	BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state [ChIP-Seq I]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8		BIGWIG	Masaki Nomura	Oct 31, 2023
GSE203318	BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state [ATAC-Seq II]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2		BW	Masaki Nomura	Oct 31, 2023
GSE203320	BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state [ChIP-Seq II]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10		BIGWIG	Masaki Nomura	Oct 31, 2023
GSE210816	Outward-oriented sites within clustered CTCF boundaries are key for intraTAD chromatin interactions and gene regulation [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4		TXT WIG	Xiao Ge	Oct 31, 2023
GSE235030	Genome-wide identification of notochord enhancers comprising the regulatory landscape of the Brachyury (T) locus in mouse	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	21		BW NARROWPEAK TXT	Frederic Koch	Oct 31, 2023
GSE236329	BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state [mouse_Brd9_ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4		BIGWIG	Masaki Nomura	Oct 31, 2023
GSE236330	BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state [mouse_Brd9_H3K27Ac-ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4		BIGWIG	Masaki Nomura	Oct 31, 2023
GSE244821	A critical role for Hepatocyte Nuclear Factor 4 alpha in polymicrobial sepsis-associated metabolic reprogramming and death: ATAC-seq after CLP sepsis model	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8		BW NARROWPEAK	Steven Timmermans	Oct 31, 2023
GSE245682	A critical role for Hepatocyte Nuclear Factor 4 alpha in polymicrobial sepsis-associated metabolic reprogramming and death: HNF4A ChIP-seq in the CLP sepsis model (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11		BW NARROWPEAK	Steven Timmermans	Oct 31, 2023
GSE245836	CD38+ Alveolar Macrophages mediate early control of M.tuberculosis proliferation in the lung [scATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1		TBI TSV	Davide Pisu	Oct 31, 2023