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19197 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			TXT
GSE205783	Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	170	BEDGRAPH BIGWIG COOL NARROWPEAK TXT	Lucille Lopez-Delisle	Apr 28, 2023
GSE210736	Chronic hypoxia remodels the tumor microenvironment to support glioma stem cell growth [scRNAseq+Multiome]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	39	H5 MTX TSV TXT XLSX	James Nicholson	Apr 03, 2024
GSE75547	Determine the effects of Hdac3 deletion on H3K27ac profiles in murine chondrocytes[ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	TXT SRA Run Selector	Jennifer Jane Westendorf	Aug 10, 2016
GSE98427	Epigenetic activation during Th17 cell differentiation is impaired after TRIM28 deletion	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	TDF TXT WIG SRA Run Selector	Huiping Lu	Feb 22, 2018
GSE115357	FBXO11-Mediated Proteolysis of BAHD1 Relieves PRC2-dependent Transcriptional Repression in Erythropoiesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	50	BW TXT SRA Run Selector	Mitch Weiss	Dec 31, 2020
GSE185066	Local euchromatin enrichment in lamina-associated domains anticipates their re-positioning in the adipogenic lineage	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	82	BED BEDGRAPH BROADPEAK BW NARROWPEAK TXT SRA Run Selector	Philippe Collas	Mar 21, 2022
GSE98378	Targeting the MTF2-MDM2 Axis Sensitizes Refractory Acute Myeloid Leukemia to Chemotherapy [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	24	BW TXT SRA Run Selector	William Stanford	Jul 31, 2018
GSE145387	The Transcriptional Repressors VAL1 and VAL2 Recruit PRC2 for Genome-wide Polycomb Silencing in Arabidopsis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	12	TXT SRA Run Selector	Liang Bing Yuan	Nov 06, 2020
GSE243020	The loss of an orphan nuclear receptor NR2E3 augments Wnt/β-Catenin signaling via epigenetic dysregulation that promotes the Sp1-β catenin-p300 interactions in hepatocellular carcinoma.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	8	TXT	Kyounghyun Kim	Aug 26, 2024
GSE118946	ZBTB12-HERVH-LncRNA axis is a molecular barrier for dedifferentiation of human stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	23	BW TXT SRA Run Selector	Guojing Liu	Jun 30, 2021
GSE34791	"Calling Cards" for DNA-binding proteins in mammalian cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	7	BED TXT SRA Run Selector	David Mayhew	Dec 31, 2011
GSE222057	(ATAC-seq_and_ChIP-seq) Spic regulates one-carbon metabolism and histone methylation in ground-state pluripotency	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	BW TXT XLSX	Yaser Atlasi	Sep 06, 2023
GSE118076	(Epi)genetic regulation of zebrafish intestinal development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Danio rerio	24	BED TXT SRA Run Selector	Leonie M Kamminga	Oct 24, 2018
GSE184611	(R)-2-hydroxyglutarate inhibits KDM5 histone lysine demethylases to drive tumorigenesis in IDH-mutant cancers	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	59	NARROWPEAK TXT SRA Run Selector	Julie-Aurore E Losman	Mar 01, 2023
GSE69180	1,25-Dihydroxyvitamin D3 Controls a Cohort of Vitamin D Receptor Target Genes in the Proximal Intestine That Is Enriched for Calcium Regulating Components	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	31	BED BEDGRAPH TXT	Mark B Meyer	Jun 03, 2015
GSE110294	2,3,7,8-Tetrachlorodibenzo-p-dioxin (TCDD) Alters Hepatic Polyunsaturated Fatty Acid Metabolism and Eicosanoid Biosynthesis in Female Sprague-Dawley Rats	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	34	TXT	Timothy Zacharewski	Dec 01, 2018
GSE126112	3D ATAC-PALM: Super-resolution Imaging of the Accessible Genome	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	14	BW HIC MCOOL TXT SRA Run Selector	Robert Tjian	Jan 29, 2020
GSE126014	3D Chromosome Structure Can Reveal Stem Cell Signatures	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	21	BW TXT	Ji Wu	Jan 20, 2022
GSE146901	3D Genome Analysis Identifies Enhancer Hijacking Mechanism for High-Risk Factors in Human T-Lineage Acute Lymphoblastic Leukemial (T-ALL)	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	52	BEDPE BW H5 HIC TXT XLS SRA Run Selector	Hong Wu	Mar 20, 2021
GSE163177	3D Genome of macaque fetal brain reveals evolutionary innovations during primate corticogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Macaca mulatta	18	BED BEDPE BW HIC NARROWPEAK TXT SRA Run Selector	Yuting Liu	Dec 15, 2020