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19184 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			TXT
GSE182881	Conformation and dynamic interactions of the multipartite genome in Agrobacterium tumefaciens	Genome binding/occupancy profiling by high throughput sequencing Other	Agrobacterium tumefaciens	42	CSV TXT SRA Run Selector	Xindan Wang	Jan 30, 2022
GSE196319	Centromere interactions promote the maintenance of the multipartite genome in Agrobacterium tumefaciens	Genome binding/occupancy profiling by high throughput sequencing Other	Agrobacterium tumefaciens Bacillus subtilis PY79	29	CSV TXT ZIP	Xindan Wang	Apr 28, 2022
GSE111068	Early metazoan cell type diversity and the evolution of multicellular gene regulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Amphimedon queenslandica Mnemiopsis leidyi Trichoplax adhaerens	10	BW TXT SRA Run Selector	Arnau Sebe-Pedros	Jul 05, 2018
GSE124016	Convergent evolution of a vertebrate-like methylome in a marine sponge	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Amphimedon queenslandica Mnemiopsis leidyi Nematostella vectensis Sycon ciliatum	36	CGMAP TXT SRA Run Selector	Alex de Mendoza	Aug 02, 2019
GSE51865	ChIP analysis unravels an exceptionally wide distribution of binding sites for the NtcA transcription factor in a heterocyst-forming cyanobacterium.	Genome binding/occupancy profiling by high throughput sequencing	Anabaena	2	BED TXT SRA Run Selector	Silvia Picossi	Jan 28, 2014
GSE97367	BioProject PRJNA381064: Convergent origination of a Drosophila-like dosage compensation mechanism in a reptile lineage (Gene expression profiling in several tetrapod species, bulk tissue RNA-seq)	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Anolis carolinensis Gallus gallus Homo sapiens Monodelphis domestica Mus musculus Ornithorhynchus anatinus Xenopus tropicalis	197	BW TXT	Diego Cortez	Oct 27, 2017
GSE120076	Chromatin changes induced by a Plasmodium falciparum infection in Anopheles gambiae	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Anopheles gambiae	14	BW TXT SRA Run Selector	Jose Luis Ruiz Rodriguez	Jan 08, 2019
GSE218880	5-methyl cytosine profile and chromatin profile of Anthoceros agrestis	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Anthoceros agrestis	20	BEDGRAPH BROADPEAK BW TXT	Tetsuya Hisanaga	Nov 10, 2023
GSE185816	Comparative ATACseq Between Killifish Species	Genome binding/occupancy profiling by high throughput sequencing	Aphyosemion australe Austrofundulus limnaeus Iconisemion striatum Nothobranchius furzeri	30	TXT SRA Run Selector	Anne Brunet	Jun 17, 2024
GSE19824	Genome-wide evolutionary analysis of eukaryotic DNA methylation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Apis mellifera Bombyx mori Chlorella variabilis Ciona intestinalis Coprinopsis cinerea Drosophila melanogaster Laccaria bicolor Nematostella vectensis Oryza sativa Phycomyces blakesleeanus Physcomitrium patens Postia placenta Selaginella moellendorffii Tetraodon nigroviridis Tribolium castaneum Uncinocarpus reesii Volvox carteri	33	GFF TXT SRA Run Selector	Toshiro Nishimura	Apr 15, 2010
GSE71847	Evolution of insect hindwing morphology: A comparative genomic analysis of targets of Hox protein Ultrabithorax	Genome binding/occupancy profiling by high throughput sequencing	Apis mellifera	12	TXT SRA Run Selector	Naveen Prasad	Aug 31, 2016
GSE85877	Transcriptomic and epigenetic responses to social challenge and their association with future behavior in honey bees (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Apis mellifera	8	BIGWIG TXT SRA Run Selector	Michael C. Saul	Mar 29, 2017
GSE85878	Transcriptomic and epigenetic responses to social challenge and their association with future behavior in honey bees	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Apis mellifera	188	BIGWIG TXT	Michael C. Saul	Mar 29, 2017
GSE110640	Queen and worker honeybee castes are defined by alternative chromatin states during larval development. [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Apis mellifera	14	TXT SRA Run Selector	Robert Lowe	Jul 27, 2018
GSE110642	Queen and worker honeybee castes are defined by alternative chromatin states during larval development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Apis mellifera	22	TXT	Robert Lowe	Jul 27, 2018
GSE113131	Honey bee neurogenomic responses to affiliative and agonistic social interactions.	Genome binding/occupancy profiling by high throughput sequencing	Apis mellifera	8	BIGWIG TXT SRA Run Selector	Michael C. Saul	Nov 29, 2018
GSE113132	Brain transcriptomic differences in response to social opportunity and social challenge in honey bees	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Apis mellifera	184	BIGWIG TXT	Michael C. Saul	Nov 29, 2018
GSE173409	Identification of Mblk-1-binding DNA regions in honey bee brains by ChIP-seq.	Genome binding/occupancy profiling by high throughput sequencing	Apis mellifera	8	TXT SRA Run Selector	Yasuhiro Matsumura	Dec 14, 2022
GSE54727	Genome-wide profiling of H3K4me3, H3K27me3 H3K27me1 and 5mC enrichment and mRNA levels in young leaves of Arabidopsis lyrata	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis lyrata	12	BED BEDGRAPH TXT SRA Run Selector	François ROUDIER	Feb 03, 2015
GSE14600	Target genes of the MADS transcription factor SEPALLATA3, ChIP-seq	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	5	TXT SRA Run Selector	Gerco Angenent	Apr 21, 2009