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1652 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			TSV
GSE70237	Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (ChIP-seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	TSV TXT SRA Run Selector	H. Leighton Grimes	Aug 26, 2016
GSE70245	Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	680	TSV TXT	H. Leighton Grimes	Aug 26, 2016
GSE75070	RUNX1 contributes to higher-order chromatin organization and gene regulation in breast cancer cells.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	14	BED MATRIX TSV TXT SRA Run Selector	Rasim Barutcu	Aug 23, 2016
GSE72143	PHB Acts as a Member of the HIRA Complex to Control an Epigenetic and Metabolic Circuitry	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BED TSV SRA Run Selector	Zhexin Zhu	Aug 11, 2016
GSE80105	Synergistic model of chromatin predicts Dnase-I accessibility	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	8	TAR TSV TXT SRA Run Selector	David Gifford	Jul 20, 2016
GSE75868	Molecular Criteria for Defining the Naive Human Pluripotent State	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	40	PILEUP TSV TXT	Joseph R Ecker	Jul 18, 2016
GSE75071	On the Origin and Evolutionary Consequences of Gene Body DNA Methylation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Arabidopsis lyrata Arabidopsis thaliana Brassica oleracea Brassica rapa Capsella rubella Eutrema salsugineum	44	BED TSV SRA Run Selector	Robert J Schmitz	Jul 11, 2016
GSE83785	Hormone induced repression of genes requires BRG1-mediated H1.2 deposition at target promoters	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	20	BED TSV TXT SRA Run Selector	François Le Dily	Jul 11, 2016
GSE81045	Zfp281 Coordinates Opposite Functions of Tet1 and Tet2 for Alternative Pluripotent States	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	BED BEDGRAPH TSV	Jianlong Wang	Jun 28, 2016
GSE74716	SMARCA4 regulates gene expression and higher-order chromatin structure in proliferating mammary epithelial cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	12	BED BEDGRAPH CSV TSV SRA Run Selector	Rasim Barutcu	Jun 02, 2016
GSE78844	Pioneering activity of the C-terminal domain of EBF1 shapes the chromatin landscape for B cell programming	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	38	BW TSV TXT	Senthilkumar Ramamoorthy	May 06, 2016
GSE80824	Identification of in vivo binding sites for YY2.	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	TSV XLSX SRA Run Selector	Jon Schoorlemmer	May 03, 2016
GSE71126	Sequence Features Accurately Predict Genome-wide MeCP2 Binding in vivo	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	13	BW TSV SRA Run Selector	Hans Tomas Rube	Mar 24, 2016
GSE75164	Sperm is epigenetically programmed to regulate gene transcription in embryo	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Xenopus laevis	106	BED BW TSV TXT SRA Run Selector	Charles Bradshaw	Mar 22, 2016
GSE71196	Identification and characterization of MCF01A circular RNAs [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	TSV TXT SRA Run Selector	Yehoshua Enuka	Dec 17, 2015
GSE71197	Identification and characterization of MCF01A circular RNAs	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	TSV TXT	Yehoshua Enuka	Dec 17, 2015
GSE67867	Competition between DNA methylation and transcription factors determines binding of NRF1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	48	BW TSV SRA Run Selector	Anais Flore Bardet	Dec 16, 2015
GSE66185	The Nucleosome Landscape of P. falciparum Reveals Chromatin Architecture and Dynamics of Regulatory Sequences	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	20	BEDGRAPH GFF TSV SRA Run Selector	Richard Csaba Bartfai	Nov 25, 2015
GSE75170	Transcriptional elongation requires DNA break-induced signaling	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	44	TSV SRA Run Selector	Heeyoun Bunch	Nov 20, 2015
GSE60955	The metabolome regulates the epigenetic landscape during naïve to primed human embryonic stem cell transition	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	18	TSV TXT WIG SRA Run Selector	Hannele Ruohola-Baker	Nov 17, 2015