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498 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			TDF
GSE101426	3D genome landscape of Epstein-Barr Virus oncoproteins and virus activated NF-kB in lymphoblastoid cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BAM TDF SRA Run Selector	Sizun Jiang	Sep 01, 2017
GSE82222	Neurospora crassa genome organization requires subtelomeric facultative heterochromatin	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Neurospora crassa	16	BCF FASTA GTF TDF TXT XLSX SRA Run Selector	Andrew David Klocko	Oct 27, 2016
GSE40472	Selective lymphoma cell killing by a PRC2 small molecule inhibitor (ChIP-Seq set 1)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BED TDF WIG SRA Run Selector	Barbara M Bryant	Dec 01, 2020
GSE40473	Selective lymphoma cell killing by a PRC2 small molecule inhibitor (ChIP-Seq set 2)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BED TDF WIG SRA Run Selector	Barbara M Bryant	Dec 01, 2020
GSE40476	Selective lymphoma cell killing by a PRC2 small molecule inhibitor	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	26	BED CEL CHP TDF WIG	Barbara M Bryant	Dec 01, 2020
GSE42374	Histone modification analysis in TGFbeta/TNFalpha treated A549 spheroid cultures	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	36	BED TDF SRA Run Selector	Marcin Piotr Cieslik	Sep 12, 2013
GSE48314	CHD5 is required for neurogenesis and has a dual role in facilitating gene expression and Polycomb gene repression	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BED TDF SRA Run Selector	Adrian P. Bracken	Aug 26, 2013
GSE50394	A mesodermal factor, T (Brachyury), specifies mouse germ cell fate by directly activating germline determinants	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BED TDF WIG SRA Run Selector	Yukihiro Yabuta	Dec 11, 2013
GSE50590	A role for H3K4 mono-methylation in facultative heterochromatin assembly and partitioning of chromatin readers	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	33	BED TDF SRA Run Selector	Roy Blum	Mar 29, 2014
GSE53491	Phenotype specific analyses of p53 reveal distinct regulatory mechanism for chronically activated p53	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	27	BED TDF SRA Run Selector	Chandra Chilamakuri	Mar 02, 2015
GSE54263	ACF chromatin remodeling complex mediates stress-induced depressive-like behavior through nucleosome repositioning and transcriptional regulation.	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	15	BED TDF WIG SRA Run Selector	Eric Nestler	Sep 21, 2015
GSE56019	Chemical Inhibition of the RORγt-dependent Transcriptional Network in Th17 cells [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BED TDF SRA Run Selector	Nir Yosef	Apr 17, 2014
GSE56020	Chemical Inhibition of the RORγt-dependent Transcriptional Network in Th17 cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	31	BED TDF TXT	Nir Yosef	Apr 17, 2014
GSE60204	Quantitative Dynamics of Chromatin Remodeling during Germ Cell Specification from Mouse Embryonic Stem Cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	54	BED TDF SRA Run Selector	Yukihiro Yabuta	Mar 20, 2015
GSE60215	A streamline experimental and computational approach for inexpensive, accurate, efficient and high-throughput annotation of 5’ and 3’ ends	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	54	BED TDF TXT WIG SRA Run Selector	Shaked Afik	Feb 13, 2017
GSE62777	Integrative analyses of human reprogramming reveal dynamic nature of induced pluripotency	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus synthetic construct	317	BED TDF TXT	Shannan Ho Sui	Jul 16, 2015
GSE65918	Oct1 and OCA-B are Selectively Required for CD4 Memory T Cell Formation and Function (ChIP-seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BED TDF XLSX SRA Run Selector	Dean Tantin	Sep 17, 2015
GSE65925	Oct1 and OCA-B are Selectively Required for CD4 Memory T Cell Formation and Function	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	BED TDF	Dean Tantin	Sep 17, 2015
GSE74520	Epigenetic Profile in Transcription elongation factors are in vivo-specific cancer dependencies in glioma	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	17	BED BIGWIG TDF SRA Run Selector	Tyler E Miller	Apr 01, 2017
GSE74529	Transcription elongation factors are in vivo-specific cancer dependencies in glioma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	26	BED BIGWIG TDF	Tyler E Miller	Apr 01, 2017