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55 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			RESULTS
GSE188493	Histone chaperone ASF1 mediates H3.3-H4 deposition in Arabidopsis	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	101	BW NARROWPEAK RESULTS TXT WIG SRA Run Selector	Zhenhui Zhong	Oct 27, 2022
GSE212801	MORC proteins regulate transcription factor binding through mediating chromatin compaction at active chromatin regions	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	39	BW NARROWPEAK RESULTS	Zhenhui Zhong	Mar 27, 2023
GSE221679	The MOM1 complex recruits the RdDM machinery via MORC6 to establish de novo DNA methylation.	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Arabidopsis thaliana	125	BW NARROWPEAK RESULTS TXT	Zhenhui Zhong	Jun 09, 2023
GSE183627	Investigating the regulatory role of KMT2D in neurodeveolopment using organoid and single cell techniques	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	86	BW MTX RESULTS TAR TSV ZIP	Yingying Zhao	Sep 06, 2024
GSE228247	3D genomic analysis reveals novel enhancer-hijacking caused by complex structural alterations that drive oncogene overexpression	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	34	BEDPE BW RESULTS	Xiaoyang Zhang	Apr 01, 2024
GSE197387	NPM1c hijacks the active trancription in leukemia development [	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	81	BW RESULTS TXT	Xiaotian Zhang	Feb 27, 2022
GSE216643	Silc1 long noncoding RNA is required for efficient memory formation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	53	BED BW MTX RESULTS TSV	Igor Ulitsky	Jul 29, 2023
GSE223453	Complex regulation of Eomes levels mediated through distinct functional features of the Meteor long non-coding RNA locus	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	120	BW RESULTS TXT	Igor Ulitsky	Apr 22, 2023
GSE176493	Comprehensive target engagement by EZH2 inhibitor CPI-0209 allows for preferential targeting of ARID1A mutant urothelial carcinoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	252	BED BROADPEAK BW NARROWPEAK RESULTS TXT	Patrick Trojer	Jun 26, 2024
GSE173316	Functional characterization of Alzheimer´s disease genetic variants in microglia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	26	RESULTS TXT	Yin Shen	Jul 28, 2023
GSE139128	Dominant role of DNA methylation over H3K9me3 for IAP silencing in endoderm	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	104	BIGWIG RESULTS TXT	Gunnar Schotta	Jul 30, 2022
GSE181554	Transcriptional constraint of EWS/FLI by an ETS transcription factor promotes Ewing sarcoma growth.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	130	BW NARROWPEAK RESULTS TAB XLS	Kenneth N Ross	Oct 05, 2022
GSE196916	Generation of transcriptional regulatory network of Lgr5+ small and large intestinal stem cells from mouse	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BW MTX NARROWPEAK RESULTS TSV	Tae-Young Roh	Apr 20, 2023
GSE196922	FOXD2-dependent genome-wide maps in HCT116 cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	47	BEDPE BW HIC NARROWPEAK RESULTS	Tae-Young Roh	Apr 20, 2023
GSE243765	Mechanoresponsive genomic enhancers potentiate the cellular response to matrix stiffness	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	63	COUNTS NARROWPEAK RESULTS TAR TXT	Timothy E Reddy	Jan 31, 2024
GSE245087	Topoisomerase I (TOP1) is a functional mitotic interactor of the bookmarking factor HNF1B	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	43	RESULTS	Marco PONTOGLIO	Oct 01, 2024
GSE172613	Phenotypic heterogeneity driven by plasticity of the intermediate EMT state governs disease progression and metastasis in breast cancer	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	35	BW NARROWPEAK RESULTS	Diwakar Pattabiraman Pattabiraman	Feb 15, 2022
GSE207773	Therapeutic induction of mesenchymal-epithelial transition via epigenetic reprogramming curtails metastatic progression and sensitizes breast cancers to treatment	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	39	RESULTS	Diwakar Pattabiraman Pattabiraman	Aug 02, 2023
GSE193393	PHF20 Activates Autophagy Genes through Enhancer Activation via H3K36me2 Binding Activity	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	28	BIGWIG RESULTS	Se Won Park	Jun 23, 2022
GSE199788	Enhancer remodeling drives MLL oncogene-dependent transcriptional dysregulation in leukemia stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	37	BW RESULTS	Feng Pan	Feb 07, 2023