GEO Browser - GEO

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54 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			RESULTS
GSE139128	Dominant role of DNA methylation over H3K9me3 for IAP silencing in endoderm	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	104	BIGWIG RESULTS TXT	Gunnar Schotta	Jul 30, 2022
GSE147088	Single Cell Sequencing Reveals Early PGC-like Intermediates During Mouse Primed to Naïve Transition	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	36	BW RESULTS TAR SRA Run Selector	Jiangping He	Mar 09, 2021
GSE162194	Cohesin-dependent chromosome loop extrusion is limited by transcription and stalled replication forks	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Saccharomyces cerevisiae	50	BW HIC RESULTS	Ryuichiro Nakato	Jun 15, 2022
GSE168260	Identification and isolation of hematopoietic stem and progenitor cell populations	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	21	BED MTX RESULTS TSV TXT	Dave M Bodine	Mar 03, 2023
GSE172613	Phenotypic heterogeneity driven by plasticity of the intermediate EMT state governs disease progression and metastasis in breast cancer	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	35	BW NARROWPEAK RESULTS	Diwakar Pattabiraman Pattabiraman	Feb 15, 2022
GSE173316	Functional characterization of Alzheimer´s disease genetic variants in microglia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	26	RESULTS TXT	Yin Shen	Jul 28, 2023
GSE173860	The Polycomb protein RING1B enables estrogen-mediated gene expression by promoting enhancer-promoter interaction and R-loop formation	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens	76	BIGWIG BW RESULTS TXT SRA Run Selector	Lluis Morey	Sep 29, 2021
GSE176493	Comprehensive target engagement by EZH2 inhibitor CPI-0209 allows for preferential targeting of ARID1A mutant urothelial carcinoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	252	BED BROADPEAK BW NARROWPEAK RESULTS TXT	Patrick Trojer	Jun 26, 2024
GSE178390	Cell cycle states of pluripotent cells dictate lineage decisions	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	65	BED RESULTS SRA Run Selector	Muhammad Awawdy	May 19, 2022
GSE179013	MYOCD is required for cardiomyocytes induction from human urine cells and fibroblasts through remodeling chromatin	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	48	BW RESULTS	Xingnan Huang	Jun 29, 2021
GSE180959	Oncogenic lncRNAs alter epigenetic memory at a fragile chromosomal site in human cancer cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	13	BED RESULTS	Songjoon Baek	Mar 09, 2022
GSE181148	Human Somitoids Generated by Reprogramming Pax8+ Urine Cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	9	BW H5 RESULTS	Xingnan Huang	Sep 01, 2022
GSE181554	Transcriptional constraint of EWS/FLI by an ETS transcription factor promotes Ewing sarcoma growth.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	130	BW NARROWPEAK RESULTS TAB XLS	Kenneth N Ross	Oct 05, 2022
GSE183627	Investigating the regulatory role of KMT2D in neurodeveolopment using organoid and single cell techniques	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	86	BW MTX RESULTS TAR TSV ZIP	Yingying Zhao	Sep 06, 2024
GSE185137	Self-Renewing Presomitic Mesoderm Progenitor Lines Reprogrammed from human urine cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	40	BW H5 RESULTS TXT	Xingnan Huang	Sep 01, 2022
GSE185884	Three-dimensional analysis of genome organization in CTCF-WT and CTCF-KO dendritic cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	92	BED BW HIC RESULTS	Hyoung-Pyo Kim	Jan 04, 2023
GSE186521	Regulatory Enhancer Profiling of Mesenchymal-type Gastric Cancer Reveals Subtype-Specific Epigenomic Landscapes and Targetable Vulnerabilities	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	163	BW RESULTS TXT WIG SRA Run Selector	Shamaine Ho	Aug 16, 2023
GSE188493	Histone chaperone ASF1 mediates H3.3-H4 deposition in Arabidopsis	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	101	BW NARROWPEAK RESULTS TXT WIG SRA Run Selector	Zhenhui Zhong	Oct 27, 2022
GSE190656	Aberrant EVI1 splicing contributes to EVI1-rearranged leukemia	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	19	RESULTS TXT	Masaki Nomura	Jun 21, 2022
GSE193393	PHF20 Activates Autophagy Genes through Enhancer Activation via H3K36me2 Binding Activity	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	28	BIGWIG RESULTS	Se Won Park	Jun 23, 2022