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695 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			MTX
GSE131600	Single-cell ATAC-Seq of cells recruited to regenerative portions of large skin wounds.	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED MTX TSV SRA Run Selector	Jeff Biernaskie	Aug 04, 2020
GSE134175	Single cell ATAC sequencing profile of quiescent mesenchymal progenitors	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED MTX TSV SRA Run Selector	Tully Michael Underhill	Dec 05, 2019
GSE136950	genesorteR: Feature Ranking in Clustered Single Cell Data	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	MTX TXT SRA Run Selector	Mahmoud M Ibrahim	Sep 30, 2020
GSE142365	Single cell ATAC-seq of cardiomyocytes from neonatal mouse hearts after injury	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED CSV H5 MTX TBI TSV SRA Run Selector	Zhaoning Wang	Mar 18, 2020
GSE179326	Gene expression profiling study by RNA-seq for identifying genes associated with epithelial-mesenchymal transition and acquired resistance to ALK inhibitors.	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	BED MTX TSV SRA Run Selector	Jong Hwan Kim	Sep 20, 2022
GSE185791	Single-cell ATACseq analysis of bone marrow stromal cells of young bones [Prrx1cre_P21_ATAC]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED MTX TSV SRA Run Selector	Noriaki Ono	Oct 16, 2021
GSE190054	FoxP3 associates with enhancer-promoter loops to regulate Treg-specific gene expression [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED MTX TBI TSV TXT SRA Run Selector	CBDM Lab	Dec 07, 2021
GSE212481	Multiomic analysis reveals conservation of cancer associated fibroblast phenotypes across species and tissue of origin [scATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED MTX TSV	Michael Januszyk	Oct 21, 2022
GSE216404	Multi-scale chromatin footprinting reveals wide-spread alterations to the structure of DNA regulatory elements [SHARE-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	BED MTX TSV	Jason Buenrostro	Mar 29, 2023
GSE237198	Mutations from IPEX patients elicit a range of phenotypes in mice [scATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	MTX TBI TSV TXT	CBDM Lab	Oct 20, 2023
GSE240657	Homeostatic, repertoire and transcriptional relationships between colon T regulatory cell subsets	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	MTX TBI TSV TXT	CBDM Lab	Dec 20, 2023
GSE263522	Single-cell multiomics profiling reveals heterogeneous transcriptional programs and microenvironment in Desmoplastic Small Round Cell Tumors [snMultiome]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	MTX TSV	Clémence Henon	Apr 15, 2024
GSE131688	Reconstruction of the global neural crest gene regulatory network in vivo [single cell]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus	2	BED MTX TSV SRA Run Selector	Tatjana Sauka-Spengler	Oct 09, 2019
GSE131873	Generating in vivo somatic mouse mosaics with locus-specific, stably-integrated transgenic elements for studies of gene function in development and tumorigenesis [scATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BED MTX TSV SRA Run Selector	AGCT Core	Sep 10, 2019
GSE142285	Designing a single cell ATAC-Seq (scATAC-Seq) dataset to validate long read RNA-Seq isoforms and benchmark scATAC-Seq analysis methods	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	BED CSV MTX TAB TSV SRA Run Selector	Shanika Amarasinghe	Dec 19, 2019
GSE143646	Joint Profiling of Chromatin Accessibility and CAR-T Integration Site Analysis at Population and Single-cell Levels II	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	2	BED MTX TXT SRA Run Selector	Wenliang Wang	Jan 15, 2020
GSE149913	Single-cell chromatin accessibility of anti-viral CD4 T cells in Bcl6 and Blimp1 deficient conditions	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BED MTX TSV SRA Run Selector	Thomas Ciucci	Nov 05, 2021
GSE157595	Gene-regulatory network analysis of ankylosing spondylitis with a single-cell chromatin accessible assay	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	BED MTX TSV SRA Run Selector	Haiyan YU	Nov 18, 2020
GSE158178	Single-Cell Chromatin Accessibility Landscape of Human Umbilical Cord Blood in Trisomy 18 Syndrome	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	BED MTX TSV SRA Run Selector	qiu fxiaofen	Jul 07, 2021
GSE158263	Gene-regulatory network analysis of systemic lupus erythermatosus with a single-cell chromatin accessible assay	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	BED MTX TSV SRA Run Selector	Haiyan YU	May 28, 2021