392 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterGenome binding/occupancy profiling by high throughput sequencing Remove filterHIC
GSE197877
Super-sized clustered loops anchored at transposon Helitrons in Xenopus tropicalis sperm associate with late gene expression during embryogenesis
67 Chuihui Hou Jan 26, 2023
GSE218519
Super-sized clustered loops anchored at transposon Helitrons in Xenopus tropicalis sperm associate with late gene expression during embryogenesis [Hi-C 2]
  • Genome binding/occupancy profiling by high throughput sequencing
2
  • Download icon HIC
Chuihui Hou Jan 26, 2023
GSE237051
Cohesin and CTCF do not assemble TADs in Xenopus sperm and male pronuclei
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
28 Roman R Stocsits Oct 25, 2023
GSE238136
The genomes and epigenomes of aquatic plants (Lemnaceae) promote triploid hybridization and clonal reproduction
66 Robert A Martienssen Dec 12, 2023
GSE120589
The mole genome reveals regulatory rearrangements associated with adaptive intersexuality
70 Francisca Martinez Real Oct 09, 2020
GSE118725
Systematic Analysis of Transcription Factors Binding to Noncoding Variants
11359 Yunjiang Qiu Oct 28, 2020
GSE157139
CRISPR and biochemical screens identify MAZ as a co-factor in CTCF-mediated insulation at Hox clusters
138 Danny Reinberg Feb 06, 2022
GSE167358
Distal and proximal cis-regulatory elements sense X-dosage and developmental state at the Xist locus
  • Genome binding/occupancy profiling by high throughput sequencing
164 Till Schwämmle Mar 04, 2021
GSE162140
A Pig BodyMap Transcriptome Reveals Diverse Tissue Physiologies and Evolutionary Dynamics of Transcription [non-human Hi-C]
  • Genome binding/occupancy profiling by high throughput sequencing
16 jin long Apr 20, 2021
GSE162148
A Pig BodyMap Transcriptome Reveals Diverse Tissue Physiologies and Evolutionary Dynamics of Transcription
553 jin long Apr 20, 2021
GSE166346
Reorganization of chromatin architecture during prenatal development of porcine skeletal muscle
17 Renqiang Yuan Jun 03, 2021
GSE168107
Generation and Characterization of Stable Pig Pre-gastrulation Epiblast Stem Cell Lines
68 Jianyong Han Dec 13, 2023
GSE176387
Three-dimensional geome study of procine livers during development and metabolic adaptation
129 Jing Li Mar 15, 2022
GSE281904
Deep conservation of cis-regulatory elements and chromatin organization in echinoderms uncover ancestral regulatory features of animal genomes
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
16 Marta Silvia Magri Nov 30, 2024
GSE216634
Sordaria macrospora wild type and developmental mutant delta-asf1
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
30 Minou Nowrousian Nov 20, 2023
GSE248144
Restriction mechanism of peri-centromeric DNA loop expansion necessary to ensure accurate chromosome segregation
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
63 Sao Anh Nguyen Dec 01, 2024
GSE162194
Cohesin-dependent chromosome loop extrusion is limited by transcription and stalled replication forks
50 Ryuichiro Nakato Jun 15, 2022
GSE167020
Chromatin Fiber Folding Represses Transcription and Loop Extrusion in Quiescent Cells
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
88
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Sarah G. Swygert Nov 04, 2021
GSE235560
Loop-extruding Smc5/6 organizes transcription-induced positive DNA supercoils.
75 Kristian Jeppsson Jan 30, 2024
GSE178673
Chromatin landscape in perinatal cardiomyocytes
28 Zhang Jing Feb 03, 2023