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11 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing				HDF5
GSE80280	3D structures of individual mammalian genomes reveal principles of nuclear organization	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	42		BED HDF5 PDB TSV TXT XYZ SRA Run Selector	Andre J Faure	Mar 07, 2017
GSE93431	Two independent modes of chromosome organization are revealed by cohesin removal	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	32		BW CSV HDF5 NARROWPEAK TSV TXT SRA Run Selector	Nezar Abdennur	Jun 10, 2017
GSE123636	An RNA binding region in CTCF regulates chromatin looping and CTCF nuclear organization	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	18		BW HDF5 HIC TXT SRA Run Selector	Robert Tjian	May 30, 2019
GSE140493	Multi-omic profiling of single nuclei uncovers regulatory diversity of brain cell types and diseases	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	8494		CSV HDF5 TSV SRA Run Selector	Joseph R Ecker	Dec 12, 2019
GSE184036	Single-cell profiling of histone modifications and transcription in developmental systems with EpiDamID	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Danio rerio Homo sapiens Mus musculus	155		BEDGRAPH BROADPEAK HDF5 NARROWPEAK TSV	Jop Kind	Apr 01, 2022
GSE92717	Regulation of yeast chromosome III architecture and mating-type switching by a Sir2/condensin-bound region of the recombination enhancer	Genome binding/occupancy profiling by high throughput sequencing Other	Saccharomyces cerevisiae	20		HDF5	Ryan D Fine	May 23, 2019
GSE117037	Depletion of limiting rDNA structural complexes triggers chromosomal instability and replicative aging of Saccharomyces cerevisiae	Genome binding/occupancy profiling by high throughput sequencing Other	Saccharomyces cerevisiae	4		HDF5 SRA Run Selector	Ryan D Fine	Mar 12, 2019
GSE126724	Comprehensive analysis of single cell ATAC-seq data with SnapATAC	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6		HDF5 SRA Run Selector	Rongxin Fang	Jan 03, 2021
GSE168182	Dynamics of synthetic yeast chromosome evolution shaped by hierarchical chromatin structures	Genome binding/occupancy profiling by high throughput sequencing Other	Saccharomyces cerevisiae	4		BW FA HDF5 SRA Run Selector	Zhou Sijie	Jun 10, 2022
GSE193598	rDNA Array Length is a Major Determinant of Replicative Lifespan in Budding Yeast - ATACseq	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	12		BW HDF5	Nathaniel H Thayer	Apr 05, 2022
GSE196959	Single-cell profiling of histone modifications and transcription in developmental systems with EpiDamID [RPE1]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	83		HDF5	Jop Kind	Apr 01, 2022