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76 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			GTF
GSE140877	Nucleosome organization dynamics during fertilization reveals regulation factors of zygotic gene activation in mouse	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	180	BW GTF	Shaorong Gao	Apr 02, 2022
GSE178096	Genetic-epigenetic interactions in paternal transgenerational inheritance of metabolic disorders	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	75	BW GTF SRA Run Selector	Anne-Sophie Pépin	Mar 30, 2022
GSE193319	ERK-Mediated Phosphorylation of OLA1 Controls Adaptive Mitochondria to Nucleus Communication Regulating Cellular Homeostasis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	10	BED GTF	Adeleye J. Afolayan	Jan 14, 2022
GSE174774	Oct4 differentially regulates chromatin opening and enhancer transcription in pluripotent stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	64	BW GTF SRA Run Selector	Le Xiong	Jun 30, 2021
GSE178556	Wdr5	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	43	BED BIGWIG BW GTF NARROWPEAK	Rajesh C Rao	Jun 22, 2021
GSE130826	Effect of Cell Division on Cell Differentiation (ChIP-Seq HUvsNoc)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	24	BW GTF SRA Run Selector	Rodrigo Andres Grandy	May 31, 2021
GSE175681	The transcriptome and genome-wide mapping of Hif1α binding sites in kidney tubule cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	4	BED BW GTF SRA Run Selector	Aiping Duan	May 28, 2021
GSE117888	Role of GR in protection of podocyte	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	16	BEDGRAPH BROADPEAK GTF HIC NARROWPEAK SRA Run Selector	Jingping Yang	May 23, 2021
GSE168776	Mapping and modeling the genomic basis of differential RNA isoform expression at single-cell resolution with LR-Split-seq	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	CSV GTF H5AD MTX NARROWPEAK SRA Run Selector	Elisabeth Rebboah	Mar 12, 2021
GSE163891	Comparative analysis among different species reveals that the androgen receptor regulates chicken follicle selection through species-specific genes related to follicle development	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Gallus gallus	63	BEDGRAPH GTF	Ying Huang	Feb 28, 2021
GSE140361	DOT1L inhibitors block abnormal self-renewal induced by cohesin loss	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	25	BIGWIG GTF	Katelyn Elizabeth Heimbruch	Feb 25, 2021
GSE147646	The transcriptome, histone modification and chromatin organization of kidney tubule cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens	11	BED BW GTF HIC SRA Run Selector	Jingping Yang	Feb 02, 2021
GSE148433	Efficient RNA polymerase II pause release requires U2 snRNP function	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	48	BW GTF SRA Run Selector	Sara Patricia Monteiro Martins	Jan 31, 2021
GSE106585	Swr1 mediated H2A.ZPht1 incorporation designates centromere DNA for de novo CENP-ACnp1 assembly	Genome binding/occupancy profiling by high throughput sequencing	Schizosaccharomyces pombe	25	BED BW FA GTF TXT SRA Run Selector	Alastair Robert Kerr	Dec 01, 2020
GSE140508	Chromatin-Associated SUMOylation Controls the Transcriptional Switch between Plant Development and Heat Stress Responses	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	29	GTF WIG	Danlu Han	Aug 04, 2020
GSE146729	TAK-418-418, a LSD1 inhibitor, can rescue the genome wide chromatin abnormality in hippocapmus tissue in KMT2D+/bGeo mice after 2 week treatment	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	45	BROADPEAK GTF	Li Zhang	Mar 11, 2020
GSE128537	Transcriptomic and open chromatin atlas of high-resolution anatomical regions in the rhesus macaque brain	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Macaca mulatta	449	BW GTF TXT SRA Run Selector	keying Lu	Dec 30, 2019
GSE141676	Rapid and Inexpensive Preparation of Genome-Wide Nucleosome Footprints from Model and Non-Model Organisms	Genome binding/occupancy profiling by high throughput sequencing	Neurospora crassa Saccharomyces cerevisiae Schizosaccharomyces pombe	13	FASTA GTF SGR SRA Run Selector	Jeffrey N McKnight	Dec 10, 2019
GSE140345	Sleep-wake driven and circadian contributions to daily rhythms in gene expression and chromatin accessibility in the murine cortex	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	123	GTF TXT SRA Run Selector	Maxime Jan	Nov 13, 2019
GSE130846	The zinc-responsive repressor Loz1 is the master regulator of zinc homeostasis in Schizosaccharomyces pombe	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Schizosaccharomyces pombe	16	BEDGRAPH GTF	Stevin Wilson	Sep 20, 2019