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62 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			COV
GSE108577	Rescue of Fragile X syndrome by DNA methylation editing of the FMR1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	35	BW COV TXT WIG	Shawn Liu	Feb 16, 2018
GSE109545	A novel role of Tet1/2 proteins in cell cycle progression of trophoblast stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	15	BED COV CSV SRA Run Selector	Myriam Hemberger	May 02, 2018
GSE120558	Gain of function DNMT3A mutations cause microcephalic dwarfism and hypermethylation of Polycomb-regulated regions	Methylation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	66	BED BIGWIG COV IDAT TXT	Duncan Sproul	Nov 26, 2018
GSE113946	Widespread transposable element-driven oncogene expression in cancers	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	6	BEDGRAPH BIGWIG COV SRA Run Selector	Daofeng Li	Feb 05, 2019
GSE126215	methyl-ATAC-seq measures DNA methylation at accessible chromatin	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BEDGRAPH BW COV SRA Run Selector	Roman Spektor	Feb 08, 2019
GSE117728	A DNMT3A PWWP mutation leads to methylation of bivalent chromatin and postnatal growth retardation in mice	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	79	COV TXT SRA Run Selector	Felix Krueger	Mar 18, 2019
GSE107580	Activation of neuronal genes via LINE-1 elements upon global DNA demethylation in human neural progenitors	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	28	BW COV TXT SRA Run Selector	Per Brattas	May 29, 2019
GSE113881	DNMT3B maintains mCA landscape and regulates mCG status of bivalent promoters in human embryonic stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	30	BW COV TXT SRA Run Selector	Jia Li	Jun 02, 2019
GSE109747	Maternal Vitamin C regulates DNA demethylation and development of the mouse embryonic germline	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	68	COV	Stephanie L Parker	Jul 01, 2019
GSE124216	Endogenous retroviral insertions drive non-canonical imprinting in extra-embryonic tissues	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	103	COV	Felix Krueger	Sep 19, 2019
GSE129673	EpiMethylTag simultaneously detects ATAC-seq or ChIP-seq signals with DNA methylation	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	26	BED BEDGRAPH BW COV NARROWPEAK TSV TXT SRA Run Selector	Priscillia Lhoumaud	Oct 01, 2019
GSE124242	De novo formation in maize from irradiated materials	Genome binding/occupancy profiling by high throughput sequencing	Zea mays	3	BED COV SRA Run Selector	Handong Su	Dec 21, 2019
GSE129037	Uncoupling histone H3K4 trimethylation from developmental gene expression via an epigenetic equilibrium of Polycomb, COMPASS and DNA methylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	128	BW COV TXT SRA Run Selector	Ali Shilatifard	Mar 17, 2020
GSE133578	The deposition of CENH3 is stringently regulated in Maize	Genome binding/occupancy profiling by high throughput sequencing	Zea mays	6	COV SRA Run Selector	Handong Su	Jun 01, 2020
GSE85356	DNA methylation repels binding of hypoxia-inducible transcription factors to maintain tumour immunotolerance	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	285	BEDGRAPH COV TSV TXT	Jieyi Xiong	Jun 18, 2020
GSE129691	Setd2 deficiency impaired erythroid differentiation and accelerated Myelodysplastic Syndrome(MDS) - associated leukemogenesis through S100A8 and S100A9	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	18	BED BROADPEAK BW COV TXT XLSX SRA Run Selector	Jiaying Zhang	Jul 02, 2020
GSE155089	Enhancer-associated H3K4 methylation safeguards in vitro germline competence	Other Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	118	BEDGRAPH BIGWIG COV	Alvaro Rada-Iglesias	Jul 27, 2020
GSE136849	Identification and Characterization of the Epigenome and Transcriptome in Human Neonates	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	492	BW COV SRA Run Selector	Yong Peng	Aug 09, 2020
GSE130140	Cancer-specific CTCF binding facilitates oncogenic transcriptional dysregulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Homo sapiens	92	BED BW COV MATRIX NARROWPEAK SF TAR TXT SRA Run Selector	Zhenjia Wang	Aug 19, 2020
GSE155269	OsChz1 acts as a histone chaperone in modulating chromatin organization and genome function in rice	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Oryza sativa	34	BED BIGWIG COV	Liufan Yin	Oct 15, 2020