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734 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			BROADPEAK
GSE151011	Mechanistic dissection of dominant AIRE mutations in mouse models reveals evidence for AIRE auto-regulation [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BED BROADPEAK SRA Run Selector	Jakub Abramson	Sep 01, 2021
GSE151013	Mechanistic dissection of dominant AIRE mutations in mouse models reveals evidence for AIRE auto-regulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	102	BED BROADPEAK NARROWPEAK	Jakub Abramson	Aug 30, 2021
GSE192873	Transcriptional regulation of the thymus master regulator Foxn1 [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BROADPEAK	Jakub Abramson	Aug 03, 2022
GSE192875	Transcriptional regulation of the thymus master regulator Foxn1	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	72	BROADPEAK BW NARROWPEAK	Jakub Abramson	Aug 03, 2022
GSE101546	SETDB1 controls T helper cell lineage integrity by repressing endogenous retroviruses	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	40	BED BROADPEAK TXT SRA Run Selector	Veronique Adoue	Feb 05, 2019
GSE118159	Epigenetic basis of CD4 T cel help for memory CD8 T cell formation	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	18	BROADPEAK NARROWPEAK SRA Run Selector	Tomasz Ahrends	Oct 23, 2019
GSE118160	CD4+ T-cell help creates effector memory CTLs with innate and help-independent recall capacities	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30	BROADPEAK NARROWPEAK	Tomasz Ahrends	Oct 23, 2019
GSE263798	Single-cell multiomic analysis identifies macrophage subpopulations in promoting cardiac repair	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BROADPEAK BW	fu Ai	Sep 06, 2024
GSE90694	Epigenome profiling and editing of neural progenitor cells in the developing mouse neocortex [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	22	BIGWIG BROADPEAK NARROWPEAK SRA Run Selector	Mareike Albert	Aug 03, 2017
GSE235010	ATAC-Seq analysis of EZH2 mutants in isogenic cell lines	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BROADPEAK BW	Julian Aldana	Jul 17, 2023
GSE235011	H3K27me3 CUT&Tag analysis of EZH2 mutants in isogenic cell lines	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BROADPEAK BW	Julian Aldana	Jul 17, 2023
GSE235014	EZH2 mutants in isogenic cell lines	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	28	BROADPEAK BW	Julian Aldana	Jul 17, 2023
GSE221611	Cut&Run SU-DIPG13 cells treated Sulfopin/Vorinostat/Sulfopin+Vorinostat or DMSO	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	9	BROADPEAK BW	Danielle Algranati	Jun 24, 2024
GSE221614	Cut&Run and MARS-seq on SU-DIPG13 cells treated Sulfopin/Vorinostat/Sulfopin+Vorinostat or DMSO	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	26	BROADPEAK BW	Danielle Algranati	Jun 24, 2024
GSE223014	Chip seq of in vitro induced senescent myeloid cells treated with HDAC inhibitor	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BROADPEAK BW	Andrea Alimonti	Mar 02, 2023
GSE130264	Chromatin Loop Extrusion Plays a Fundamental Mechanistic Role in Antibody Class Switching [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	31	BROADPEAK BW SRA Run Selector	Frederick W Alt	Sep 25, 2019
GSE130270	Chromatin Loop Extrusion Plays a Fundamental Mechanistic Role in Antibody Class Switching	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	149	BEDGRAPH BROADPEAK BW TXT	Frederick W Alt	Sep 25, 2019
GSE142779	CTCF orchestrates long-range cohesin-driven V(D)J recombinational scanning [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	BROADPEAK BW SRA Run Selector	Frederick W Alt	May 11, 2020
GSE142781	CTCF orchestrates long-range cohesin-driven V(D)J recombinational scanning	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	170	BEDGRAPH BROADPEAK BW TXT	Frederick W Alt	May 11, 2020
GSE111902	Compendium of CD8+ T cell Data	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Third-party reanalysis	Mus musculus	67	BROADPEAK BW NARROWPEAK TSV TXT SRA Run Selector	Robert Anthony Amezquita	Mar 17, 2018