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176 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			BEDPE
GSE193238	A primed immune transcriptional programme is activated in oligodendroglia in multiple sclerosis [ATAC-Seq and RNA-Seq]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BEDPE H5 RDS TBI TSV WIG	Eneritz Agirre	Jan 28, 2022
GSE193240	A primed immune transcriptional programme is activated in oligodendroglia in multiple sclerosis [ATAC-Seq and RNA-Seq II]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BED BEDPE H5 RDS TBI TSV WIG	Eneritz Agirre	Jan 28, 2022
GSE183556	MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	550	BEDPE TXT	Asifa Akhtar	Aug 10, 2023
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE130224	The Fundamental Role of Chromatin Loop Extrusion in Physiological V(D)J Recombination	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Genome variation profiling by high throughput sequencing	Mus musculus	133	BED BEDGRAPH BEDPE BW HIC TXT	Frederick W Alt	Aug 19, 2019
GSE213644	Systematic mapping of 3D enhancer interactions reveals lineage specific regulatory networks during early mouse developmental decisions [HiChIP]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BEDPE	Effie Apostolou	Aug 21, 2023
GSE265888	Dynamic Chromatin Boundaries of TCR Loci Coincide V(D)J recombination During T Cell Development	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	79	BED BEDGRAPH BEDPE BROADPEAK BW CSV HIC MATRIX TXT	Hao bingtao	Apr 27, 2024
GSE197024	Epigenetic modules governing skin epidermal homeostasis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	46	BED BEDPE HIC TXT	Stephen R Brooks	Jan 13, 2023
GSE172358	Differential Regulation of Transcription Factor T-bet Induction during NK Cell Development and Th1 Cell Differentiation	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	21	BED BEDPE NARROWPEAK SRA Run Selector	Yaqiang Cao	Feb 03, 2022
GSE180175	Hi-TrAC reveals fine-scale chromatin structures organized by transcription factors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	136	BEDPE BW TXT SRA Run Selector	Yaqiang Cao	Oct 02, 2022
GSE204946	Restraint of IFN-γ expression through a distal silencer CNS–28 for tissue homeostasis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	92	BEDPE BW TXT	Yaqiang Cao	Mar 01, 2023
GSE208085	Hi-TrAC Detects Active Sub-TADs and Reveals Internal Organizations of Super-Enhancers	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	53	BEDPE TXT	Yaqiang Cao	Apr 25, 2023
GSE214438	Age-associated chromatin re-organization in progenitor B cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Genome variation profiling by high throughput sequencing	Mus musculus	76	BED BEDPE TXT	Yaqiang Cao	Mar 01, 2024
GSE237916	Regulation of T helper cell differentiation by the interplay between histone modification and chromatin interaction	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	197	BEDPE BW DIFF TXT	Yaqiang Cao	Mar 01, 2024
GSE213300	Charting the impact of supraphysiologic MDM2 on gene regulatory circuits in sarcoma	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens	156	BED BEDPE BW TXT	Salvador Casani	Apr 10, 2023
GSE243851	Nuclear Organization of Lens Epithelium and Fiber Cells in Newborn Lens	Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED BEDGRAPH BEDPE BW HIC NARROWPEAK	William Chang	Oct 16, 2023
GSE146731	Histone H3.3G34-mutant interneuron progenitors co-opt PDGFRA for gliomagenesis	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	80	BEDPE BW TXT SRA Run Selector	Carol Chen	Nov 30, 2020
GSE187034	ChIA-PET from activated CD8-positive, alpha-beta memory T cell (ENCSR114KEO)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	BED BEDPE BIGBED BIGINTERACT BIGWIG HIC TXT	ENCODE DCC	Nov 04, 2021
GSE187036	ChIA-PET from activated CD8-positive, naive alpha-beta T cell (ENCSR114QCL)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	BED BEDPE BIGBED BIGINTERACT BIGWIG HIC TXT	ENCODE DCC	Nov 04, 2021
GSE187058	ChIA-PET from CD4-positive naive resting alpha-beta T cell (ENCSR120LMS)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	BED BEDPE BIGBED BIGINTERACT BIGWIG HIC TXT	ENCODE DCC	Nov 04, 2021