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2868 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			BEDGRAPH
GSE205783	Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	170	BEDGRAPH BIGWIG COOL NARROWPEAK TXT	Lucille Lopez-Delisle	Apr 28, 2023
GSE185066	Local euchromatin enrichment in lamina-associated domains anticipates their re-positioning in the adipogenic lineage	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	82	BED BEDGRAPH BROADPEAK BW NARROWPEAK TXT SRA Run Selector	Philippe Collas	Mar 21, 2022
GSE242677	New Drosophila promoter-associated architectural protein Mzfp1 interacts with CP190 and is required for housekeeping gene expression and insulator activity [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	23	BEDGRAPH NARROWPEAK	Natalia Klimenko	Jul 17, 2024
GSE244758	The Transcription factor NF-YA is Crucial for Neural Progenitor Maintenance during Brain Development	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BEDGRAPH NARROWPEAK	Tomoyuki Yamanaka	Jan 11, 2024
GSE55904	"Drug-seq": An Approach to Identify the Genomic Targets of Chemicals Identified by Functional Phenotypic Screens	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	6	BEDGRAPH	MICHAEL G ROSENFELD	Jul 01, 2014
GSE55901	"Drug-seq": An Approach to Identify the Genomic Targets of Chemicals Identified by Functional Phenotypic Screens [Drug-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	BEDGRAPH SRA Run Selector	MICHAEL G ROSENFELD	Jul 01, 2014
GSE69180	1,25-Dihydroxyvitamin D3 Controls a Cohort of Vitamin D Receptor Target Genes in the Proximal Intestine That Is Enriched for Calcium Regulating Components	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	31	BED BEDGRAPH TXT	Mark B Meyer	Jun 03, 2015
GSE69179	1,25-Dihydroxyvitamin D3 Controls a Cohort of Vitamin D Receptor Target Genes in the Proximal Intestine That Is Enriched for Calcium Regulating Components (ChIP-seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BED BEDGRAPH SRA Run Selector	Mark B Meyer	Jun 03, 2015
GSE28067	24 Hour ORC ChIP-Seq experiment	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	4	BEDGRAPH GFF3 SRA Run Selector	DCC modENCODE	Mar 23, 2011
GSE28068	24 Hour RNA PolII ChIP-Seq experiment	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	4	BEDGRAPH GFF3 SRA Run Selector	DCC modENCODE	Mar 23, 2011
GSE36106	4-7 Hour ORC ChIP-Seq experiment	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	4	BEDGRAPH TSV SRA Run Selector	DCC modENCODE	Feb 27, 2012
GSE36107	4-7 Hour PolII ChIP-Seq experiment	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	4	BEDGRAPH TSV SRA Run Selector	DCC modENCODE	Feb 27, 2012
GSE77645	4C-ker: A method to reproducibly identify genome-wide interactions captured by 4C-Seq experiments	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Mus musculus	16	BED BEDGRAPH TXT SRA Run Selector	Jane Skok	Feb 27, 2016
GSE111190	4Cseq analysis of neural stem/progenitor cells (NSC) from wild type and Sox2-deleted mouse neonatal forebrain	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	46	BEDGRAPH SRA Run Selector	Federico Zambelli	Mar 07, 2019
GSE218880	5-methyl cytosine profile and chromatin profile of Anthoceros agrestis	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Anthoceros agrestis	20	BEDGRAPH BROADPEAK BW TXT	Tetsuya Hisanaga	Nov 10, 2023
GSE158966	A BRD4-mediated elongation control point primes transcribing RNA polymerase II for 3'-processing and termination	Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	56	BEDGRAPH BW	Dr. Andreas Mayer	Jul 30, 2021
GSE27060	A Bcl6-Smrt/Ncor repression program controls atherosclerosis	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BEDGRAPH TXT	Ruth T Yu	Mar 30, 2012
GSE102590	A Cdk9-PP1 switch regulates the elongation-termination transition of RNA polymerase II	Other Genome binding/occupancy profiling by high throughput sequencing	Schizosaccharomyces pombe	52	BEDGRAPH BIGWIG BW SRA Run Selector	PABITRA K PARUA	Jun 07, 2018
GSE159044	A Chinese hamster transcription start site atlas that enables targeted editing of CHO cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Cricetulus griseus	72	BED BEDGRAPH TSV SRA Run Selector	Nathan E Lewis	Oct 06, 2020
GSE269235	A Constitutive Heterochromatic Region Shapes Genome Organization and Impacts Gene Expression in Neurospora crassa	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Neurospora crassa	23	BEDGRAPH BIGWIG H5 TXT	Andrew David Klocko	Jun 10, 2024