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2860 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			BEDGRAPH
GSE65478	Androgen Receptor profiling in tumor specimens yields hallmarks of prostate cancer outcome	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	26	BED BEDGRAPH SRA Run Selector	Wilbert Zwart	Sep 30, 2015
GSE138168	Region-wide subsets of AR, FOXA1 and H3K27ac ChIP-Seq within three primary prostate adenocarcinoma, three metastatic castratation-resistant and prostate cell-lines.	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Homo sapiens	17	BED BEDGRAPH TXT	Wilbert Zwart	Oct 01, 2019
GSE221965	Molecular characterization of bat embryonic fibroblasts and induced pluripotent stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Rhinolophus ferrumequinum	33	BEDGRAPH BW	Thomas Zwaka	Feb 27, 2023
GSE197265	Translatome and transcriptome co-profiling reveals a role of TPRXs in human zygotic genome activation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	226	BEDGRAPH BW TXT	Zhuoning Zou	Oct 08, 2022
GSE57431	HEXIM1 is induced by DHODH inhibition to suppress melanoma [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BEDGRAPH SRA Run Selector	Leonard Zon	Apr 08, 2016
GSE57432	HEXIM1 is induced by DHODH inhibition to suppress melanoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	12	BEDGRAPH	Leonard Zon	Apr 08, 2016
GSE68044	Nucleotide stress induction of HEXIM1 suppresses melanoma by modulating cancer cell-specific gene transcription [ChIP-Seq2]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BEDGRAPH SRA Run Selector	Leonard Zon	Jan 01, 2017
GSE68047	Nucleotide stress induction of HEXIM1 suppresses melanoma by modulating cancer cell-specific gene transcription [reChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BEDGRAPH SRA Run Selector	Leonard Zon	Jan 01, 2017
GSE68052	Nucleotide stress induction of HEXIM1 suppresses melanoma by modulating cancer cell-specific gene transcription [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BEDGRAPH SRA Run Selector	Leonard Zon	Jan 01, 2017
GSE119189	Tri-4C: efficient and quantitative analysis of enhancer loops at hundred base pair resolution	Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	44	BEDGRAPH BIGWIG NARROWPEAK	Yizhou Zhu	Aug 28, 2020
GSE93127	Comprehensive characterization of neutrophil genome topology	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	51	BED BEDGRAPH CSV TXT SRA Run Selector	Yina Zhu	Feb 06, 2017
GSE66898	Disease-Associated SNPs From non-Coding Regions in Juvenile Idiopathic Arthritis Are Located Within or Adjacent to Functional Genomic Elements of Human Neutrophils and CD4+ T Cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	12	BEDGRAPH TXT	Lisha Zhu	Jun 12, 2015
GSE89320	A Pair of Transposon-derived Proteins Function in A Histone Acetyltransferase Complex for Active DNA Demethylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	16	BEDGRAPH TDF WIG	Jian-Kang Zhu	Dec 29, 2016
GSE111609	Arabidopsis AGDP1 links H3K9me2 to DNA methylation in heterochromatin	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	31	BEDGRAPH WIG SRA Run Selector	Jian-Kang Zhu	Oct 23, 2018
GSE115170	Histone acetylation recruits the SWR1 complex to regulate active DNA demethylation in Arabidopsis	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	53	BEDGRAPH WIG SRA Run Selector	Jian-Kang Zhu	Aug 01, 2019
GSE145258	ICE1 ChIP-Seq	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	2	BEDGRAPH SRA Run Selector	Jian-Kang Zhu	Feb 20, 2020
GSE154302	A histone H3K4me1 specific binding protein is involved in RdDM	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana	22	BEDGRAPH WIG SRA Run Selector	Jian-Kang Zhu	Mar 08, 2021
GSE148958	Systematic Functional Characterization of Antisense eRNA of Protocadherin alpha HS5-1 Enhancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	274	BEDGRAPH FPKM_TRACKING HIC SRA Run Selector	Yuxiao Zhou	Oct 02, 2021
GSE199214	The steroid hormone estriol (E3) regulates epigenetic programming of fetal mouse brain and reproductive tract	Expression profiling by array Methylation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	24	BEDGRAPH CEL CHP GFF	Yuping Zhou	Mar 31, 2022
GSE199293	The steroid hormone estriol (E3) regulates epigenetic programming of fetal mouse brain and reproductive tract [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BEDGRAPH	Yuping Zhou	Mar 23, 2023