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16 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing					Hyoung-Pyo Kim
GSE151502	Genome-wide maps of chromatin state in liver.	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	18		BED BROADPEAK BW NARROWPEAK SRA Run Selector	Hyoung-Pyo Kim	Jul 27, 2021
GSE151503	RNA-Seq, ChIP-Seq and HiC of Wild Type and CTCF cKO Liver	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30		BED BROADPEAK BW HIC NARROWPEAK TXT	Hyoung-Pyo Kim	Jul 27, 2021
GSE157949	p53 influences 5-FU-induced chromatin accessibility [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8		BED BW SRA Run Selector	Hyoung-Pyo Kim	Feb 10, 2021
GSE158021	Different p53 status controls resistance to 5-fluorouracil via distinct chromatin accessibility dynamics in human colorectal cancer cell line	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	26		BED BW NARROWPEAK TXT	Hyoung-Pyo Kim	Feb 10, 2021
GSE179540	Genome-wide maps of chromatin state in HCT116 colorectal cancer cell (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	20		BED BW SRA Run Selector	Hyoung-Pyo Kim	Jan 04, 2022
GSE185880	Three-dimensional analysis of genome organization in CTCF-WT and CTCF-KO dendritic cells (ChIP-seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	34		BED BW SRA Run Selector	Hyoung-Pyo Kim	Jan 04, 2023
GSE185884	Three-dimensional analysis of genome organization in CTCF-WT and CTCF-KO dendritic cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	92		BED BW HIC RESULTS	Hyoung-Pyo Kim	Jan 04, 2023
GSE227660	Genome-wide transcriptional, epigenetic, and topological changes occurring in human natural killer cells in response to HDAC inhibitor [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	9		BED BW	Hyoung-Pyo Kim	Jun 02, 2023
GSE227661	Genome-wide transcriptional, epigenetic, and topological changes occurring in human natural killer cells in response to HDAC inhibitor [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4		BED BW	Hyoung-Pyo Kim	Jun 02, 2023
GSE227664	Genome-wide transcriptional, epigenetic, and topological changes occurring in human natural killer cells in response to HDAC inhibitor	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	27		BED BW HIC RESULTS	Hyoung-Pyo Kim	Jun 02, 2023
GSE157950	p53 influences 5-FU-induced chromatin accessibility [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2		BW NARROWPEAK SRA Run Selector	Hyoung-Pyo Kim	Feb 10, 2021
GSE179545	Genome-wide maps of chromatin state in HCT116 colorectal cancer cell	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens	40		BW TXT	Hyoung-Pyo Kim	Jan 04, 2022
GSE215042	Three-dimensional analysis of genome organization in CTCF-WT and CTCF-KO dendritic cells (ChiP-Seq II)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8		BW	Hyoung-Pyo Kim	Jan 04, 2023
GSE179170	in situ Hi-C in WT and CTCF depleted mouse livers	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4		HIC SRA Run Selector	Hyoung-Pyo Kim	Jul 27, 2021
GSE185883	Three-dimensional analysis of genome organization in CTCF-WT and CTCF-KO dendritic cells (HiChIP)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10		HIC SRA Run Selector	Hyoung-Pyo Kim	Jan 04, 2023
GSE227663	Genome-wide transcriptional, epigenetic, and topological changes occurring in human natural killer cells in response to HDAC inhibitor [HiChIP]	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	4		HIC	Hyoung-Pyo Kim	Jun 02, 2023