GEO Browser - GEO

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25 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing				Lucille Lopez-Delisle
GSE205783	Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	170	BEDGRAPH BIGWIG COOL NARROWPEAK TXT	Lucille Lopez-Delisle	Apr 28, 2023
GSE272483	CTCF-dependent insulation of Hoxb13 and the heterochronic control of tail length	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Third-party reanalysis	Mus musculus	54	BW NARROWPEAK TAR	Lucille Lopez-Delisle	Jul 18, 2024
GSE272379	CTCF-dependent insulation of Hoxb13 and the heterochronic control of tail length [CUT&RUN]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BW NARROWPEAK	Lucille Lopez-Delisle	Jul 18, 2024
GSE272382	CTCF-dependent insulation of Hoxb13 and the heterochronic control of tail length [ChIPM]	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Mus musculus	4	BW NARROWPEAK	Lucille Lopez-Delisle	Jul 18, 2024
GSE194114	Context-dependent enhancer function revealed by targeted inter-TAD relocation	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	34	BED BW COOL NARROWPEAK TXT	Lucille Lopez-Delisle	May 17, 2022
GSE194109	Context-dependent enhancer function revealed by targeted inter-TAD relocation [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	13	BW NARROWPEAK	Lucille Lopez-Delisle	May 17, 2022
GSE194110	Context-dependent enhancer function revealed by targeted inter-TAD relocation [CUT&RUN]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BW NARROWPEAK	Lucille Lopez-Delisle	May 17, 2022
GSE194111	Context-dependent enhancer function revealed by targeted inter-TAD relocation [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BW NARROWPEAK	Lucille Lopez-Delisle	May 17, 2022
GSE181387	Cumulative in-cis mutagenesis in vivo reveals various functions for CTCF sites at the mouse Hoxd cluster	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	86	BW COOL NARROWPEAK TXT	Lucille Lopez-Delisle	Oct 05, 2021
GSE181383	Cumulative in-cis mutagenesis in vivo reveals various functions for CTCF sites at the mouse Hoxd cluster [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BW NARROWPEAK SRA Run Selector	Lucille Lopez-Delisle	Oct 05, 2021
GSE181384	Cumulative in-cis mutagenesis in vivo reveals various functions for CTCF sites at the mouse Hoxd cluster [ChIPmentation]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30	BW NARROWPEAK SRA Run Selector	Lucille Lopez-Delisle	Oct 05, 2021
GSE161386	DBX2 REGULATION IN LIMBS SUGGESTS INTER-TAD SHARING OF ENHANCERS	Genome binding/occupancy profiling by high throughput sequencing Other Third-party reanalysis	Mus musculus	10	BEDGRAPH	Lucille Lopez-Delisle	Jan 23, 2021
GSE161377	DBX2 REGULATION IN LIMBS SUGGESTS INTER-TAD SHARING OF ENHANCERS [ChIP-Seq reanalysis]	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Mus musculus		BROADPEAK BW NARROWPEAK TXT	Lucille Lopez-Delisle	Jan 23, 2021
GSE166584	Induction of a chromatin boundary in vivo upon insertion of a TAD border	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	15	BED BEDGRAPH BW COOL TXT	Lucille Lopez-Delisle	Jul 05, 2021
GSE166574	Induction of a chromatin boundary in vivo upon insertion of a TAD border (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BED BEDGRAPH FA SRA Run Selector	Lucille Lopez-Delisle	Jul 05, 2021
GSE165495	Mesomelic Dysplasias Associated With The HOXD Locus Are Caused By Regulatory Reallocations	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing Third-party reanalysis	Mus musculus	23	BW COOL NARROWPEAK TAR TXT	Lucille Lopez-Delisle	Jul 20, 2021
GSE165490	Mesomelic Dysplasias Associated With The HOXD Locus Are Caused By Regulatory Reallocations [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BW NARROWPEAK SRA Run Selector	Lucille Lopez-Delisle	Jul 20, 2021
GSE165492	Mesomelic Dysplasias Associated With The HOXD Locus Are Caused By Regulatory Reallocations [CUT&RUN]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BW NARROWPEAK SRA Run Selector	Lucille Lopez-Delisle	Jul 20, 2021
GSE165761	Mesomelic Dysplasias Associated With The HOXD Locus Are Caused By Regulatory Reallocations [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Mus musculus		BW NARROWPEAK	Lucille Lopez-Delisle	Jul 20, 2021
GSE205779	Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	82	BEDGRAPH BIGWIG NARROWPEAK	Lucille Lopez-Delisle	Apr 28, 2023