GEO Browser - GEO

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37 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome binding/occupancy profiling by high throughput sequencing			WIG
GSE207058	BORIS/CTCFL epigenetically reprograms clustered CTCF binding sites into alternative transcriptional start sites.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	140	XLSX WIG BIGWIG BEDGRAPH	Elena Pugacheva	Jan 03, 2024
GSE138816	Histone demethylase KDM6A promotes somatic cell reprogramming by epigenetically regulate PTEN and IL-6 signal pathway [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	WIG SRA Run Selector	Qi Jiang	Oct 20, 2021
GSE138817	Histone demethylase KDM6A promotes somatic cell reprogramming by epigenetically regulate PTEN and IL-6 signal pathway	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	18	WIG	Qi Jiang	Oct 20, 2021
GSE150506	KMT9 controls growth and stemness of colorectal cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	72	WIG BED	Christopher Berlin	Nov 29, 2021
GSE154175	A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis [SCATAC_10X]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	WIG TSV RDS H5 CSV BED SRA Run Selector	Eneritz Agirre	May 21, 2021
GSE154475	MLL3/MLL4 methyltransferase activities control early embryonic development and ESC differentiation in a lineage-selective manner	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	100	WIG TXT BIGWIG SRA Run Selector	Kai Ge	Jan 25, 2023
GSE155882	A Transcriptional Switch Governs Fibroblast Activation in Heart Disease	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	56	WIG TSV MTX CSV BW BIGWIG BED SRA Run Selector	Pawel Przytycki	Apr 08, 2021
GSE160605	MED1 is a lipogenesis co-activator required for postnatal adipose expansion	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	46	WIG TXT BIGWIG SRA Run Selector	Kai Ge	Mar 17, 2021
GSE165725	Two enhancers synergistically regulate HoxB genes expressions and retinoic acid-induced early ESCs differentiation through 3D chromatin structure	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	22	WIG TXT BW SRA Run Selector	Niannian Li	Mar 01, 2021
GSE166179	A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	1185	WIG SF H5 CSV	Eneritz Agirre	May 21, 2021
GSE173189	A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	WIG SRA Run Selector	Eneritz Agirre	Jan 28, 2022
GSE176459	DNA sequence determines epigenetic bistability at imprinting control regions [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	WIG SRA Run Selector	Tuncay Baubec	Jul 20, 2022
GSE176461	DNA sequence and chromatin modifiers determine epigenetic bistability at imprinting control regions	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	7	WIG TAB COV	Tuncay Baubec	Jul 20, 2022
GSE184470	Evidence that direct inhibition of transcription factor binding is the prevailing mode of gene and repeat repression by DNA methylation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	98	WIG	Dirk Schuebeler	Sep 29, 2022
GSE193238	A primed immune transcriptional programme is activated in oligodendroglia in multiple sclerosis [ATAC-Seq and RNA-Seq]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	WIG TSV TBI RDS H5 BEDPE	Eneritz Agirre	Jan 28, 2022
GSE199541	Dissecting the roles of MBD2 isoforms and domains in regulating NuRD complex func-tion during cellular differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30	WIG TAB	Tuncay Baubec	May 23, 2023
GSE200472	NOTCH-YAP1/TEAD-DNMT1 axis drives hepatocyte reprogramming into intrahepatic cholangiocarcinoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	19	WIG TAB BW	Shuchang Liu	Jul 25, 2023
GSE200580	Chromatin opening by p53 is confined by Trim24 in a histone methylation-dependent manner [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	67	WIG BW	Luke Thomas Isbel	Apr 30, 2023
GSE200582	Chromatin opening by p53 is confined by Trim24 in a histone methylation-dependent manner [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	58	WIG BW	Luke Thomas Isbel	Apr 30, 2023
GSE200586	Chromatin opening by p53 is confined by Trim24 in a histone methylation-dependent manner	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	174	WIG BW	Luke Thomas Isbel	Apr 29, 2023