GEO Browser - GEO

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841 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome binding/occupancy profiling by high throughput sequencing			TXT
GSE158435	Single-cell joint detection of chromatin occupancy and transcriptome enables higher-dimensional epigenomic reconstructions	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	16491	BED BW TXT SRA Run Selector	Haiqing Xiong	Mar 05, 2021
GSE87064	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	868	BED BW MTX TSV TXT	Beisi Xu	May 03, 2017
GSE214496	DNA methylation restricts default deterministic fates towards neural and germline lineages	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	853	BW TXT	teissandier aurelie	Oct 09, 2023
GSE219239	Unbiased profiling of clinical kinase inhibitors’ effects in activated macrophages using chromatin modifications as high-content readouts [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	564	BW TXT	Francesco Gualdrini	Apr 16, 2024
GSE183556	MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	550	BEDPE TXT	Asifa Akhtar	Aug 10, 2023
GSE189563	Mitotic bookmarking by SWI/SNF subunits	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	460	BED BW NARROWPEAK TXT	Zhexin Zhu	Mar 18, 2023
GSE223578	Dynamic DNA methylation turnover at the exit of pluripotency epigenetically primes gene regulatory elements for hematopoietic lineage specification	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Mus musculus	299	TXT	Simon Richard Andrews	Jan 24, 2023
GSE241347	Chromatin-associated LTR RNA m5C oxidation by TET2 regulates leukemogenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	291	BED BIGWIG BROADPEAK NARROWPEAK TXT	Xiaoyang Dou	Jul 24, 2024
GSE230380	Olfactory receptor mRNAs act as selfish non-coding RNAs that enforce transcriptional singularity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	279	GTF H5 TSV TXT	Ariel Pourmorady	Sep 28, 2023
GSE206011	Stepwise de novo establishment of inactive X chromosome architecture in early development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	262	BW TXT	Zhenhai Du	Sep 10, 2024
GSE185708	A hyper-quiescent chromatin state is a barrier to productive regeneration during aging.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	256	BW TXT	Supriyo De	Mar 17, 2023
GSE199024	The Fgf/Erf/NCoR1/2 repressive axis controls trophoblast cell fate	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	248	CSV TXT	Andreas Lackner	Apr 26, 2023
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE158730	NFI transcription factors regulate zonal olfactory receptor expression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	237	BIGWIG BW CIF CLOUPE COOL CSV H5 JSON PNG TIFF TXT SRA Run Selector	Elizaveta Bashkirova	Jun 14, 2023
GSE270434	Bidirectional histone monoaminylation dynamics regulate neural rhythmicity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	234	TXT	Benjamin H Weekley	Oct 10, 2024
GSE246791	Single-cell analysis of chromatin accessibility in the adult mouse brain	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	228	CSV H5AD TXT	Songpeng Zu	Nov 02, 2023
GSE184894	SMYD5 catalyzes histone H3 lysine 36 trimethylation at promoters	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	223	BW TXT SRA Run Selector	Dong Fang	Apr 26, 2022
GSE160764	Epigenetic signals that direct cell type specific interferon beta response in mouse cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	221	BED MTX TAR TSV TXT SRA Run Selector	Markus Muckenhuber	Dec 31, 2022
GSE178852	The Pol II prenitiation complex (PIC) influences Mediator binding but not promoter-enhancer looping	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	212	BEDGRAPH TXT XLSX	Fei Sun	Jul 22, 2021
GSE203194	Multifaceted SOX2-chromatin interaction underpins pluripotency progression in early embryos	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	207	BW TXT	Lijia Li	Dec 15, 2023