GEO Browser - GEO

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66 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome binding/occupancy profiling by high throughput sequencing			TAR
GSE155677	Multimodal profiling of the transcriptional regulatory landscape of the developing mouse cortex identifies Neurog2 as a key epigenome remodeler	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Escherichia coli Mus musculus	36	BED BEDGRAPH BW FA MTX PICKLE TAR TSV TXT SRA Run Selector	Boyan Bonev	Jan 27, 2022
GSE159468	Hijacking of transcriptional condensates by endogenous retroviruses	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	78	BED BW HIC TAR TSV SRA Run Selector	Sara Hetzel	Mar 30, 2022
GSE160764	Epigenetic signals that direct cell type specific interferon beta response in mouse cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	221	BED MTX TAR TSV TXT SRA Run Selector	Markus Muckenhuber	Dec 31, 2022
GSE161570	KMT2C Loss Promotes Small Cell Lung Cancer Metastasis through DNMT3A-mediated Epigenetic Reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	55	BED BW CGMAP CSV GAPPEDPEAK TAR XLSX SRA Run Selector	Xaingyu Pan	Feb 23, 2022
GSE167552	The stress response regulator HSF1 modulates natural killer cell anti-tumour immunity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	21	BED BW TAR TSV	Kathryn Grace Hockemeyer	Feb 26, 2021
GSE198423	CD8+ T cell responsiveness to anti-PD-1 is epigenetically regulated by Suv39h1 in melanomas	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	21	BED TAR	Paul Gueguen	Mar 14, 2022
GSE218274	PAX3-FOXO1 expression in endothelial progenitors dictates myogenic reprogramming and rhabdomyosarcoma identity	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	75	BED BW HIC TAR TDF TXT	Hongjian Jin	Sep 29, 2023
GSE224894	Polycomb Repressive Complex 2 regulates basal cell fate during adult olfactory neurogenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	13	BED BIGWIG BW TAR	Bradley Goldstein	Sep 18, 2023
GSE231869	Modulation of CTCF barrier permeability by ZFP661 enhances protocadherin diversity for proper cortical dendritic projection in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	90	BED BW NARROWPEAK TAR TXT	Jinpu Jin	May 09, 2023
GSE189287	Liver ILC2s suppress gluconeogenesis and limit blood glucose elevation through IL-13 signaling	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30	BEDGRAPH TAR	Masanori Fujimoto	Jul 27, 2022
GSE201751	Global transcriptional, ATAC-sequencing, and methylation analyses of mouse totipotent potential stem cells and extended pluripotent stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	37	BEDGRAPH TAR TXT	Yiming Sun	May 04, 2022
GSE209965	Decitabine-induced T cell remodeling facilitates a high antitumor response to PD-1 blockade therapy by promoting the expansion and effector function of CD8+ progenitor exhausted T cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	24	BEDGRAPH TAR	Jing Nie	Jul 28, 2022
GSE169044	Transcription factor antagonism regulates heterogeneity in embryonic stem cell states	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	101	BIGWIG TAR XLSX SRA Run Selector	Sofia Hu	Nov 21, 2022
GSE199357	Autoreactive CD8+ T cells are restrained by an exhaustion-like program that is maintained by LAG3	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	23	BIGWIG TAR TXT	Anthony Richard Cillo	Apr 08, 2022
GSE147088	Single Cell Sequencing Reveals Early PGC-like Intermediates During Mouse Primed to Naïve Transition	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	36	BW RESULTS TAR SRA Run Selector	Jiangping He	Mar 09, 2021
GSE150280	Negative Elongation Factor (NELF) regulates muscle progenitor expansion for efficient myofiber repair and stem cell pool repopulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	35	BW NARROWPEAK TAR	Jeffrey Dilworth	Mar 18, 2021
GSE154521	Temporal Analyses of Cardiac Chromatin Accessibility, DNA Methylation and Epigenomic Structure Reveal Locus-Specific Regulation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	47	BW CGMAP TAR	Tom Vondriska	Dec 01, 2021
GSE172526	Postnatal expansion of the lymph node stromal cell pool towards reticular and CD34+ stromal cell subsets	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	86	BW TAR	Joern Pezoldt	Oct 07, 2022
GSE185271	Proper parental histone allocation is required for mouse embryonic stem cell differentiation and histone post-transcription modification inheritance	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	143	BW TAR TSV SRA Run Selector	haiyun gan	May 15, 2023
GSE186833	RNA-Seq and CUT&Tag of satellite stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	BW SF TAR	Jeffrey Dilworth	Aug 04, 2022