GEO Browser - GEO

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562 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome binding/occupancy profiling by high throughput sequencing			SRA Run Selector
GSE98101	Spatial-temporal epigenetic landscape of mouse gastrula	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	120	BW TAGALIGN TXT XLS SRA Run Selector	Naihe Jing	Oct 07, 2019
GSE108770	Hypoxia-induced priming of microglial inflammatory gene expression is associated with TLR4 signaling H3K4me3 enrichment	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	28	BEDGRAPH DIFF TDF SRA Run Selector	Jyoti Watters	Feb 04, 2020
GSE114981	Activation of HOTTIP lncRNA perturbs HSC function leading to AML like disease	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	66	BED TXT SRA Run Selector	Suming Huang	Dec 03, 2019
GSE115096	HOXBLINC is aberrantly expressed in acute myeloid leukemia and functions as a potent oncogenic long non-coding RNA in leukemogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	40	BED TXT SRA Run Selector	Suming Huang	Jan 27, 2021
GSE117529	RNA/WES/ATAC/scRNA sequencing of murine melanoma primary and LN metastases	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	58	BW MTX TSV TXT SRA Run Selector	Nathan Edward Reticker-Flynn	Jun 14, 2021
GSE118785	H3K36me2 recruits DNMT3A and shapes intergenic DNA methylation landscapes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens Mus musculus	43	BW TDF SRA Run Selector	Carmen Rivas	Aug 30, 2019
GSE120393	Polycomb Mediated Chromatin Organization Reveals Transcriptional Silencers Required for Embryonic Development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	107	BIGWIG BROADPEAK FPKM_TRACKING HIC NARROWPEAK TXT SRA Run Selector	Chia-Lin Wei	Jan 07, 2020
GSE122589	Transcription factor activity and nucleosome organisation in mitosis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	97	BW TSV SRA Run Selector	Pablo Navarro	Dec 04, 2018
GSE124463	Promoter capture Hi-C identifies long-range promoter contact dynamics in response to diet and the development of non-alcoholic fatty liver disease	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	46	BED BIGWIG TXT SRA Run Selector	Paul A Wade	Jan 01, 2020
GSE124517	Regulation of neuronal commitment in mouse embryonic stem cells by the Reno/Bahcc1 locus	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	77	BW NARROWPEAK TXT SRA Run Selector	Igor Ulitsky	Sep 13, 2020
GSE124540	ChIP-seq and RNA-seq analysis of histone Kcr in the embryonic forebrain and neural stem/progenitor cells.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	30	BED BW TXT SRA Run Selector	Dai Shang Kun	Jun 22, 2021
GSE124596	A conserved noncoding locus modulates random monoallelic Xist expression across a TAD boundary	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	56	BED BEDGRAPH BW CSV TXT SRA Run Selector	Nicolas Servant	Dec 01, 2019
GSE125068	Immediate and deferred epigenomic signatures of in vivo neuronal activation in mouse hippocampus	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	40	SRA Run Selector	Angel Barco	Sep 03, 2019
GSE125203	Chromatin accessibility landscape upon induction of Msgn1, Pax3 and Myf5 in mesodermal cells and identification of conserved Pax3 binding sites and target genes during skeletal myogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	65	BED XLSX SRA Run Selector	Alessandro Magli	Feb 26, 2019
GSE125595	RNA interactions are essential for proper CTCF function	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	24	BW CLOUPE HIC TXT SRA Run Selector	Ricardo Saldana-Meyer	Sep 12, 2019
GSE125972	A distal super enhancer mediates estrogen-dependent mouse uterine–specific gene transcription of Insulin-like growth factor 1 (Igf1)	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	38	BIGWIG HIC TXT SRA Run Selector	Sylvia C Hewitt	May 08, 2019
GSE128535	Histone 3 K9 and K27 acetylation of enhancers in response to thyroid hormone	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	56	BED BEDGRAPH TXT SRA Run Selector	Lars Grøntved	Jul 01, 2019
GSE128671	Replicational dilution of H3K27me3 in mammalian cells and the role of poised promoters	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	47	BW MTX TSV TXT SRA Run Selector	Ramesh Shivdasani	Jan 17, 2020
GSE129037	Uncoupling histone H3K4 trimethylation from developmental gene expression via an epigenetic equilibrium of Polycomb, COMPASS and DNA methylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	128	BW COV TXT SRA Run Selector	Ali Shilatifard	Mar 17, 2020
GSE131336	Chromatin architecture as a checkpoint for NASH-associated liver injury	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	17	BW CSV SRA Run Selector	Jiandie Lin	Sep 10, 2019