GEO Browser - GEO

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40 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome binding/occupancy profiling by high throughput sequencing			RDS
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE154175	A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis [SCATAC_10X]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BED CSV H5 RDS TSV WIG SRA Run Selector	Eneritz Agirre	May 21, 2021
GSE193238	A primed immune transcriptional programme is activated in oligodendroglia in multiple sclerosis [ATAC-Seq and RNA-Seq]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BEDPE H5 RDS TBI TSV WIG	Eneritz Agirre	Jan 28, 2022
GSE237987	ARID1A Orchestrates SWI/SNF-mediated Sequential Binding of Transcription Factors and Its Deficiency Drives Pre-memory B-cell Fate and Lymphomagenesis [Arid1a_multiome]	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	14	RDS TBI TSV	Christopher Russell Chin	Feb 02, 2024
GSE260504	ATAC-seq of TNF-alpha activation in HEK cells with or without TRAFTAC against NfkB	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BW NARROWPEAK RDS	Pierre-Luc Germain	Mar 04, 2024
GSE161374	Addiction-associated genetic variants implicate brain cell type- and region-specific cis-regulatory elements in addiction neurobiology	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	35	BW NARROWPEAK RDS SRA Run Selector	BaDoi Nguyen Phan	Jul 13, 2021
GSE239999	An Exhausted-Like Microglial Population Accumulates in Aged and APOE4 Genotype Alzheimer’s Brains	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	27	H5 RDS SF TBI TSV	Alon Millet	Dec 29, 2023
GSE228660	An atlas of gene regulatory networks for T memory cells in youth and old age [scATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED MTX RDS TSV XLSX	Joseph Wayman	Aug 07, 2023
GSE153331	Astrocyte Reactivity and Cognitive Decline Follow Chronic Heterochromatin Loss in Neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	71	BEDGRAPH BW COV CSV RDS TXT SRA Run Selector	Andrew Newman	Jan 10, 2024
GSE244709	Astrocyte allocation during brain development is controlled by Tcf4-mediated fate restriction	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	BROADPEAK CSV NARROWPEAK RDS TXT	Yunli Xie	Aug 14, 2024
GSE240583	Baf155 establishes chromatin priming to promote hematopoietic regeneration and function [single cell multiome - ATAC + GEX]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	ARROW MTX RDS TSV	Changxu Fan	Jul 09, 2024
GSE183765	BlCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	118	BED BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE247130	CEBPA restricts alveolar type 2 cell plasticity during development and injury-repair [1]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BROADPEAK CLOUPE H5 RDS TBI TSV	Dalia Hassan	Apr 18, 2024
GSE264098	CEBPA restricts alveolar type 2 cell plasticity during development and injury-repair [scATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BROADPEAK BW RDS	Dalia Hassan	Apr 16, 2024
GSE183766	CaBl: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	171	BED BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE249785	Childhood cancer mutagenesis caused by a domesticated DNA transposase	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	RDS	Claudia L Kleinman	Mar 27, 2024
GSE253954	Conserved dorsal horn neuron subtype-specific enhancers are implicated in the genetic risk of chronic pain.	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Macaca mulatta Mus musculus	17	RDS TAR	Michael Leone	Aug 01, 2024
GSE187332	Decay of heterochromatin domains at selective gene loci in aging mouse brain cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	59	RDS TXT SRA Run Selector	Bing Ren	Sep 13, 2022
GSE219015	Deciphering cell states and genealogies of human hematopoiesis with single-cell multi-omics	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	56	H5 RDS TAR TSV TXT	Chen Weng	Nov 18, 2023
GSE250589	Distinct transcriptomic and epigenomic responses of mature oligodendrocytes during disease progression in a mouse model of multiple sclerosis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	56	BEDPE BW CSV H5 RDS TBI TSV	Bastien Hervé	Dec 20, 2023