GEO Browser - GEO

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223 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome binding/occupancy profiling by high throughput sequencing			MTX
GSE222454	Multimodal profiling reveals site-specific adaptation and tissue residency hallmarks of γδ T cells across organs in mice	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	21	CSV H5 MTX TSV	Sagar -	Nov 05, 2023
GSE237830	Flexible and scalable control of T cell memory by a reversible epigenetic switch	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	BW H5 MTX TSV TXT	Kathleen Abadie	Jul 25, 2023
GSE236667	Thymic mimetic cells function beyond self-tolerance [scATAC-Seq Multiome]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	MTX TSV	Jakub Abramson	Aug 28, 2023
GSE141825	Single-cell ATAC-seq of mouse thymus iNKT cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BED CSV H5 MTX TBI TSV SRA Run Selector	Indra Adrianto	Jun 27, 2023
GSE165114	Multiomic sequencing of the MGE	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	CSV MTX TSV SRA Run Selector	Kathryn Allaway	Sep 22, 2021
GSE165233	Genetic and epigenetic coordination of cortical interneuron development	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	27	BED BW CSV MTX TSV	Kathryn Allaway	Sep 22, 2021
GSE193321	The transcriptional and regulatory identity of erythropoietin producing cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	154	MTX TSV TXT	Ido Amit	Mar 13, 2023
GSE216542	scRNA-seq, snATAC-seq, and spatial transcriptomics analysis of mammary glands of aged female mice	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	22	CSV JPG JSON MTX PNG RDS TIFF TSV TXT XLSX	Olga Anczukow	Sep 29, 2024
GSE217986	Homeostatic PD-1 signalling restrains Eomes-dependent oligoclonal expansion of liver- resident CD8 T cells.	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	14	BIGWIG CSV MTX TSV	Abdulkader AZOUZ	Jan 15, 2023
GSE164935	Genetic control of pluripotency epigenome informs differentiation bias in mouse embryonic stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	180	CSV MTX TSV SRA Run Selector	Christopher Baker	Oct 05, 2021
GSE169055	Integrative molecular roadmap for reprogramming mouse fibroblasts into induced myogenic stem and progenitor cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	55	BED MTX TSV TXT	Ori Bar-Nur	Jan 06, 2022
GSE197859	A spatio-temporally constrained gene regulatory network directed by PBX1/2 acquires limb patterning specificity via HAND2	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	33	BED MTX TSV TXT	Iros Barozzi	Apr 26, 2023
GSE155677	Multimodal profiling of the transcriptional regulatory landscape of the developing mouse cortex identifies Neurog2 as a key epigenome remodeler	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Escherichia coli Mus musculus	36	BED BEDGRAPH BW FA MTX PICKLE TAR TSV TXT SRA Run Selector	Boyan Bonev	Jan 27, 2022
GSE208742	Direct neuronal reprogramming of mouse astrocytes is associated with multiscale epigenome remodeling and requires Yy1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	64	BED BEDGRAPH BW MTX NARROWPEAK TAB TSV TXT XLSX SRA Run Selector	Boyan Bonev	Apr 30, 2024
GSE267982	In vivo interaction screening reveals liver-derived constraints to metastasis [Single Cell Multiome ATAC + Gene Expression]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED CSV H5 MTX TSV	Costanza Borrelli	May 21, 2024
GSE199480	Divergent transcriptional regulation of astrocyte reactivity across disorders [TR_ATAC_LPS]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED H5 MTX TSV	Joshua Evan Burda	May 26, 2022
GSE199481	Divergent transcriptional regulation of astrocyte reactivity across disorders [TR_ATAC_SCI]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED H5 MTX TSV	Joshua Evan Burda	May 26, 2022
GSE199482	Divergent transcriptional regulation of astrocyte reactivity across disorders	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	41	BED H5 MTX TSV	Joshua Evan Burda	May 26, 2022
GSE207943	Epigenetic plasticity cooperates with emergent cell-cell interactions to drive neoplastic tissue remodeling in the pancreas	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	59	BW CSV H5 MTX	Cassandra Burdziak	Apr 27, 2023
GSE180866	Harnessing matrix stiffness to engineer a bone marrow niche for hematopoietic stem cell rejuvenation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	41	BW CSV MTX TSV TXT SRA Run Selector	Dandan Cao	Apr 06, 2023