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14 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome binding/occupancy profiling by high throughput sequencing				MCOOL
GSE162617	Transcription Factors Recruit the Cohesin Loader NIPBL to Promote Chromatin Looping and Long-range Gene Regulation	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	11		HIC MCOOL SRA Run Selector	Gordon Hager	Jun 01, 2021
GSE178348	TCF-1 mediates 3D genome reconfiguration during T cell development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	40		BED BW HIC MCOOL TXT	Wenliang Wang	Feb 24, 2022
GSE178982	Enhancer-promoter interactions and transcription are maintained upon acute loss of CTCF, cohesin, WAPL, and YY1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	173		BW MCOOL SRA Run Selector	Xavier Darzacq	Jul 15, 2021
GSE183806	Chromatin architecture of B cell development during the humoral immune response	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	107		BIGWIG BW MCOOL NARROWPEAK SF	Ashley Stephen Doane	Sep 09, 2021
GSE184129	Nucleome programming is required for the foundation of totipotency in mammalian germline development [Hi-C]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12		BED BW FANC MCOOL SRA Run Selector	Yukihiro Yabuta	Jun 15, 2022
GSE191312	multi-omic analysis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11		BW CSV MCOOL MTX TSV	John James Tello-Cajiao	Apr 01, 2022
GSE198182	A de novo transcription-dependent TAD boundary underpins critical multiway interactions during antibody class switch recombination	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	69		BW MCOOL TAB	Maximilian Christian von der Linde	Jan 20, 2023
GSE201852	TF co-binding to nucleosome arrays	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	116		BW MCOOL	Abdenour Soufi	Sep 27, 2024
GSE207225	Ultra-deep 3D genome structure mapping with Region Capture Micro-C	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	18		BW MCOOL	Viraat Y Goel	Jul 12, 2022
GSE210289	Igh and Igk loci use different folding principles for V gene recombination due to distinct chromosomal architectures of pro-B and pre-B cells	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	36		BED BEDGRAPH HIC MCOOL TXT	Meinrad Busslinger	Jan 15, 2023
GSE213501	Enhancer Cis Elements Instruct Promoter-Enhancer Interaction, Promoter-Enhancer Insulation and Compartmental Segregation	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	30		BIGWIG HIC MCOOL	Hanbin Lu	Dec 31, 2023
GSE228880	RIF1 regulates early replication timing in murine B cells.	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	69		BEDGRAPH BW HIC MCOOL	Tobias Neumann	Jun 13, 2023
GSE234295	Systematic assessment of ISWI subunits reveals that NURF creates local accessibility for CTCF	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	124		MCOOL WIG	Dirk Schuebeler	Mar 11, 2024
GSE256246	Putative looping factor ZNF143/ZFP143 is an essential transcriptional regulator with no looping function.	Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	104		BEDGRAPH BW MCOOL	Domenic Narducci	Mar 07, 2024