60 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterPlatform: GPL24247 Remove filterGenome binding/occupancy profiling by high throughput sequencing Remove filterHIC
GSE169121
Tcf1 is essential for initiation of oncogenic Notch1-driven chromatin topology.
61 Nadine Fournier Jan 21, 2022
GSE176066
NicE-C efficiently reveals open chromatin associated chromosome interactions at high resolution
32 Zhengyu Luo Jan 18, 2022
GSE191146
Deeply hidden genome organization mediated by base-unpairing regions (BURs) directly bound by SATB1 linked to transcription
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
38 Terumi Kohwi-Shigematsu Dec 28, 2021
GSE190057
FoxP3 associates with enhancer-promoter loops to regulate Treg-specific gene expression
  • Genome binding/occupancy profiling by high throughput sequencing
15 CBDM Lab Dec 03, 2021
GSE168524
NEURON-SPECIFIC CHROMOSOMAL MEGADOMAIN ORGANIZATION IS ADAPTIVE TO RECENT RETROTRANSPOSON EXPANSIONS
72 Sandhya Chandrasekaran Oct 11, 2021
GSE162617
Transcription Factors Recruit the Cohesin Loader NIPBL to Promote Chromatin Looping and Long-range Gene Regulation
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
11 Gordon Hager Jun 01, 2021
GSE157339
Architectural role of cell-fate-instructive transcription factor MyoD in orchestrating 3D genome organization in muscle cells.
122 Yong Zhang May 01, 2021
GSE144834
Balancing cohesin eviction and retention prevents aberrant chromosomal interactions, Polycomb-mediated repression, and X-inactivation
94 Andrea June Kriz Mar 15, 2021
GSE167358
Distal and proximal cis-regulatory elements sense X-dosage and developmental state at the Xist locus
  • Genome binding/occupancy profiling by high throughput sequencing
164 Till Schwämmle Mar 04, 2021
GSE130725
H4K20me3 methyltransferase SUV420H2 shapes the three-dimensional chromatin landscape of pluripotent embryonic stem cells
26 Benjamin L Kidder Nov 13, 2020
GSE154051
Calcium Signaling Prompts NIPBL Recruitment at Active Enhancers and Promoters via Distinct Mechanisms to Reconstruct Genome Compartmentalization
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
165 Cornelis Murre Oct 10, 2020
GSE143293
Histone 1 deficiency drives lymphomagenesis through disruption of 3D chromatin architecture
53 Matt Teater Sep 02, 2020
GSE110061
Direct DNA crosslinking with CAP-C uncovers transcription-dependent chromatin organization at high resolution
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
76 Youzhi Cheng Aug 22, 2020
GSE153402
CTCF Mediates Dosage and Sequence-context-dependent Transcriptional Insulation through Formation of Local Chromatin Domains [Hi-C and PLAC-seq]
  • Other
  • Genome binding/occupancy profiling by high throughput sequencing
14 Bing Ren Jul 06, 2020
GSE153403
CTCF Mediates Dosage and Sequence-context-dependent Transcriptional Insulation through Formation of Local Chromatin Domains
88 Bing Ren Jul 06, 2020
GSE140363
Defining the relative and combined contribution of CTCF and CTCFL to genomic regulation
122 Nishana Mayilaadumveettil Apr 14, 2020
GSE120393
Polycomb Mediated Chromatin Organization Reveals Transcriptional Silencers Required for Embryonic Development
107 Chia-Lin Wei Jan 07, 2020
GSE125595
RNA interactions are essential for proper CTCF function
24 Ricardo Saldana-Meyer Sep 12, 2019
GSE125972
A distal super enhancer mediates estrogen-dependent mouse uterine–specific gene transcription of Insulin-like growth factor 1 (Igf1)
38 Sylvia C Hewitt May 08, 2019
GSE126362
Pax3 cooperates with Ldb1 to direct local chromosome architecture during lineage specification
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
60 Alessandro Magli Apr 16, 2019