GEO Browser - GEO

Series

Samples

Platforms

DataSets

1330 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome binding/occupancy profiling by high throughput sequencing			BW
GSE217745	Aberrant accumulation of Kras-dependent pervasive transcripts during tumor progression renders cancer cells dependent on PAF1 expression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	BW	Xiangzheng Liu	Nov 01, 2023
GSE242201	DNA methylation shapes the Polycomb landscape during the exit from naive pluripotency	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	39	BW	Julien Richard Albert	Jul 16, 2024
GSE164906	"Stripe" transcription factors provide accessibility to co-binding partners in mammalian genomes.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis Genome variation profiling by high throughput sequencing	Mus musculus	476	BW TAB VCF	Yongbing Zhao	Jul 21, 2022
GSE214264	3D genome structures of single differentiating mouse ES cells reveal a unique reorganisation of chromatin in the formative state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	101	BROADPEAK BW CSV NARROWPEAK NCC TSV TXT	David Lando	Jan 19, 2024
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE269169	A CRISPR/Cas9 screen in embryonic stem cells reveals that Mdm2 regulates totipotency exit [CUT&Tag]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BIGWIG BW NARROWPEAK	Qingxiang Gao	Jul 01, 2024
GSE212002	A Critical Role of RUNX1 in Governing Megakaryocyte-Primed Hematopoietic Stem Cell Differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	120	BW MTX TSV TXT	Chen Wang	Jan 20, 2023
GSE212001	A Critical Role of RUNX1 in Governing Megakaryocyte-Primed Hematopoietic Stem Cell Differentiation [CUT&RUN Chip-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	BW TXT	Chen Wang	Jan 20, 2023
GSE256183	A DGCR8/FLII-dominated on-off switch for immediate-early genes governs embryo implantation in mouse and human [Cut&Tag]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	72	BW	Xuehui Lv	Jul 08, 2024
GSE260639	A MOZ-TIF2 leukemic mouse model displays KAT6 inhibitor-sensitive H3K23 propionylation and dysregulation of a set of highly active developmental genes [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BW	Mitzi I Kuroda	Jul 03, 2024
GSE260640	A MOZ-TIF2 leukemic mouse model displays KAT6 inhibitor-sensitive H3K23 propionylation and dysregulation of a set of highly active developmental genes [Cut&Run]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BW	Mitzi I Kuroda	Jul 03, 2024
GSE213880	A MTA2-SATB2 chromatin complex restrains colonic plasticity toward small intestine by retaining HNF4A at colonic chromatin	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	40	BED BW	Wei Gu	Mar 07, 2024
GSE246223	A Mouse Model for Metabolic Dysfunction-associated Steatotic Liver Disease and Hepatocellular Carcinoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	160	BED BW	Byung-Kwan Jeong	Jun 16, 2024
GSE252186	A Negative Feedback Loop Between TET2 and Leptin in Adipocyte Regulates Body Weight	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BED BW	Qin Zeng	Feb 29, 2024
GSE166922	A Nuclear factor I-X mediated regulatory network governs the balance of hematopoietic stem and progenitor cells during hematopoiesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	24	BW RDATA SRA Run Selector	Shannon McKinney-Freeman	Dec 02, 2022
GSE196946	A Synthetic Lethality Screen Reveals ING5 as a Genetic Dependency of Catalytically Dead Set1A/COMPASS in Mouse Embryonic Stem Cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	94	BW	Bercin K Cenik	Mar 28, 2022
GSE155882	A Transcriptional Switch Governs Fibroblast Activation in Heart Disease	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	56	BED BIGWIG BW CSV MTX TSV WIG SRA Run Selector	Pawel Przytycki	Apr 08, 2021
GSE137285	A WIZ/Cohesin/CTCF complex anchors DNA loops to define gene expression and cell identity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	22	BW	Jill Dowen	Apr 14, 2020
GSE137272	A WIZ/Cohesin/CTCF complex anchors DNA loops to define gene expression and cell identity [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BW SRA Run Selector	Jill Dowen	Apr 14, 2020
GSE147568	A cis-acting mechanism mediates trancriptional memory at Polycomb target genes in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	101	BW TXT	Daniel Holoch	Aug 19, 2021