GEO Browser - GEO

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155 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome binding/occupancy profiling by high throughput sequencing			BEDGRAPH
GSE186281	Genome wide mapping of chromatin accessibility in resident memory precursor cells [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BEDGRAPH SRA Run Selector	Dorina Avram	Jun 08, 2023
GSE186282	Mapping Bcl11b binding in in vitro differentiated resident memory T cells [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BEDGRAPH SRA Run Selector	Dorina Avram	Jun 08, 2023
GSE186907	Regulation of CD8+ T cell differentiation by the transcription factor Bcl11b	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	36	BEDGRAPH BW NARROWPEAK	Dorina Avram	Jun 08, 2023
GSE185255	Integration of 3D genome architecture and local chromatin features uncovers enhancers underlying craniofacial-specific cartilage defects	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	24	BED BEDGRAPH COOL NARROWPEAK SRA Run Selector	Qian Bian	Jan 04, 2023
GSE212488	Hepatic GATA4 regulates cholesterol and triglyceride homoestasis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	74	BEDGRAPH BW	Lara Bideyan	Dec 16, 2022
GSE265888	Dynamic Chromatin Boundaries of TCR Loci Coincide V(D)J recombination During T Cell Development	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	79	BED BEDGRAPH BEDPE BROADPEAK BW CSV HIC MATRIX TXT	Hao bingtao	Apr 27, 2024
GSE234699	SMYD5 is a regulator of the mild hypothermia response	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	127	BEDGRAPH BROADPEAK BW H5	Hans Tomas Bjornsson	Jul 26, 2024
GSE155677	Multimodal profiling of the transcriptional regulatory landscape of the developing mouse cortex identifies Neurog2 as a key epigenome remodeler	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Escherichia coli Mus musculus	36	BED BEDGRAPH BW FA MTX PICKLE TAR TSV TXT SRA Run Selector	Boyan Bonev	Jan 27, 2022
GSE208742	Direct neuronal reprogramming of mouse astrocytes is associated with multiscale epigenome remodeling and requires Yy1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	64	BED BEDGRAPH BW MTX NARROWPEAK TAB TSV TXT XLSX SRA Run Selector	Boyan Bonev	Apr 30, 2024
GSE210289	Igh and Igk loci use different folding principles for V gene recombination due to distinct chromosomal architectures of pro-B and pre-B cells	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	36	BED BEDGRAPH HIC MCOOL TXT	Meinrad Busslinger	Jan 15, 2023
GSE205043	The mismatch-repair proteins MSH2 and MSH6 interact with the imprinting control regions through the ZFP57-KAP1 complex	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	7	BEDGRAPH BW	Francesco Cecere	Aug 16, 2022
GSE203091	The long noncoding RNA Malat1 regulates CD8+ T cell differentiation by mediating epigenetic repression (CUT&RUN)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BEDGRAPH	John Chang	May 18, 2022
GSE203092	The long noncoding RNA Malat1 regulates CD8+ T cell differentiation by mediating epigenetic repression	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	28	BEDGRAPH MTX TSV TXT	John Chang	May 17, 2022
GSE243851	Nuclear Organization of Lens Epithelium and Fiber Cells in Newborn Lens	Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED BEDGRAPH BEDPE BW HIC NARROWPEAK	William Chang	Oct 16, 2023
GSE229687	Effect of lncMGC on gene expression of kidney mesangial cells under SD or TGF-ß treatment [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BEDGRAPH	Zhuo Chen	Jun 21, 2023
GSE229689	Effect of lncMGC on gene expression of kidney mesangial cells under SD or TGF-ß treatment	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	32	BEDGRAPH TXT	Zhuo Chen	Jun 21, 2023
GSE146782	The role of IL-33 on red pulp macrophage (RPM) development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	48	BEDGRAPH TXT SRA Run Selector	Davide Chiarugi	Mar 11, 2020
GSE160653	The chromatin and regulatory properties of pluripotency-associated poised enhancers are conserved in vivo [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus Mus musculus	3	BEDGRAPH NARROWPEAK SRA Run Selector	Giuliano Crispatzu	Dec 31, 2020
GSE160654	The chromatin and regulatory properties of pluripotency-associated poised enhancers are conserved in vivo [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus Mus musculus	12	BEDGRAPH BROADPEAK NARROWPEAK SRA Run Selector	Giuliano Crispatzu	Dec 31, 2020
GSE160656	The chromatin and regulatory properties of pluripotency-associated poised enhancers are conserved in vivo [HiChIP]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	13	BED BEDGRAPH TXT SRA Run Selector	Giuliano Crispatzu	Dec 31, 2020