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2859 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing
GSE152607	Emergence of a high-plasticity cell state during lung cancer evolution	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Mus musculus	7452	H5 TBI TSV	Matan Hofree	Jul 24, 2020
GSE121708	Multi-omics profiling of mouse gastrulation at single cell resolution	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5263	TSV	Felix Krueger	Sep 30, 2019
GSE190415	Oncogenic RAS triggers stem cell: microenvironment crosstalk to drive malignant progression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2344	NARROWPEAK	Katherine Stewart	Oct 09, 2022
GSE197590	Wound memory of epidermal stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2252		Andrea Lauria	Feb 02, 2023
GSE188119	fate-restricted HSCs	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1921		Claus Nerlov	Feb 22, 2023
GSE147299	BMP signaling: at the gate between activated melanocyte stem cells and differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1815	BW NARROWPEAK	Katherine Stewart	Nov 12, 2020
GSE162044	Reactivation of the pluripotency program precedes formation of the cranial neural crest	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1804	COV	Antoine Zalc	Feb 11, 2021
GSE65360	Single-cell chromatin accessibility data using scATAC-seq	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	1632	BED SRA Run Selector	Jason Daniel Buenrostro	Jun 17, 2015
GSE168415	DNMT3B supports meso-endoderm differentiation from mouse embryonic stem cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	1606	BW NARROWPEAK	Andrea Lauria	Jan 23, 2023
GSE185380	Multi-omics approaches reveal TNF-mediated inhibition of tissue reparative macrophages is via a gene-selective transcriptional mechanism	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1573	BW	Assa Yeroslaviz	Jan 11, 2022
GSE219096	Epigenetic profiles of young vs old Vwf+ HSCs at single cell level	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1392	TXT	Claus Nerlov	Feb 22, 2023
GSE166179	A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	1185	CSV H5 SF WIG	Eneritz Agirre	May 21, 2021
GSE90850	Epithelial-Mesenchymal Micro-Niches Govern Stem Cell Lineage Choices	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1130	NARROWPEAK TXT	Hanseul Yang	Apr 18, 2017
GSE271007	Stem cells tightly regulate dead cell clearance to maintain tissue fitness	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1093	NARROWPEAK	Katherine Stewart	Jun 28, 2024
GSE80483	A multi-step transcriptional and chromatin cascade underlies motor neuron programming	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	887	BW TXT	Shaun Mahony	Dec 07, 2016
GSE146508	Transcriptome and open chromatin analysis of 5-month mouse liver and blood by the TaRGET II consortium	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	849	CSV NARROWPEAK SRA Run Selector	Daofeng Li	May 20, 2020
GSE89285	Integrative analysis of single-cell ATAC-seq and RNA-seq using Self-Organizing Maps	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	833		Camden Jansen	Feb 14, 2019
GSE219240	Unbiased profiling of clinical kinase inhibitors’ effects in activated macrophages using chromatin modifications as high-content readouts	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	789	BW	Francesco Gualdrini	Apr 16, 2024
GSE121690	Single-cell methylation and accessibility of mouse embryos E4.5 to E7.5. First batch.	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	758	TSV SRA Run Selector	Felix Krueger	Sep 30, 2019
GSE153847	Landscape of Monoallelic DNA Accessibility and Gene Regulatory Networks during Reprogramming to Naive Pluripotency and X Chromosome Reactivation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	727		Vincent Pasque	Sep 30, 2021