GEO Browser - GEO

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114 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing			XLSX
GSE73372	AP-1 family members act at DNA targets in conjunction with Sox9 to promote chondrocyte hypertrophy	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	6	BED XLSX SRA Run Selector	Xinjun He	Feb 29, 2016
GSE90533	An HDAC3-PROX1 Corepressor Module Acts on HNF4α to Control Hepatic Triglycerides	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	34	BED BIGWIG XLSX SRA Run Selector	Manashree Damle	Jul 26, 2017
GSE104891	Regulation of mesenchymal stem to transit amplifying cell transition in the continuously growing mouse incisor [Histone ChIP]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BED TXT XLSX SRA Run Selector	Paul T. Sharpe	Mar 12, 2019
GSE104892	Regulation of mesenchymal stem to transit amplifying cell transition in the continuously growing mouse incisor [Ring1b ChIP]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BED TXT XLSX SRA Run Selector	Paul T. Sharpe	Mar 12, 2019
GSE110209	Spatiotemporal pattern of the transcriptional regulatory landscape of the mouse ventricle after myocardial infarction	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	36	BED XLSX SRA Run Selector	Vincent M. Christoffels	Jul 22, 2019
GSE112199	High-resolution, in vivo genome binding interactions of the mouse and human constitutive androstane receptors in rodent liver reveal species differences and novel cancer-related target genes	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	BED BW XLSX SRA Run Selector	Curtis J. Omiecinski	Oct 08, 2018
GSE127247	Control of noncoding RNA production and histone levels by a 5’ tRNA fragment	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	48	BED XLSX SRA Run Selector	Mike Levine	Jan 17, 2020
GSE128150	Interrogating histone acetylation and BRD4 as mitotic bookmarks of transcription [TFs]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	15	BED TXT XLSX SRA Run Selector	Ross Hardison	Apr 10, 2019
GSE128161	Interrogating histone acetylation and BRD4 as mitotic bookmarks of transcription [Histones]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	29	BED TXT XLSX SRA Run Selector	Ross Hardison	Apr 10, 2019
GSE128466	Eomes and Brachyury control pluripotency exit and germ-layer segregation by changing the chromatin state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	82	BED BIGWIG TXT XLSX SRA Run Selector	Sebastian J. Arnold	Dec 02, 2019
GSE134652	Dynamic regulation of chromatin accessibility by pluripotency transcription factors across the cell cycle [OCT4OFF SOX2OFF ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BED BW XLSX SRA Run Selector	David Michael Suter	Nov 26, 2019
GSE134673	Dynamic regulation of chromatin accessibility by pluripotency transcription factors across the cell cycle [MD-OCT4 ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	BED BW XLSX SRA Run Selector	David Michael Suter	Nov 26, 2019
GSE134675	Dynamic regulation of chromatin accessibility by pluripotency transcription factors across the cell cycle [OCT4-AID ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	54	BED BW XLSX SRA Run Selector	David Michael Suter	Nov 26, 2019
GSE141440	Sphingosine 1-phosphate receptor signaling establishes AP-1 transcriptional factor gradients and permits retinal endothelial specialization	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	22	BED BW XLSX SRA Run Selector	Eric Engelbrecht	Dec 05, 2019
GSE149031	Che-1/AATF-induced transcriptionally active chromatin promotes cell proliferation in Multiple Myeloma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	33	BED BROADPEAK BW TSV TXT XLSX SRA Run Selector	Maurizio Fanciulli	Dec 08, 2020
GSE156117	Analysis of the effect of TSLP stimulated CD4+T cells on epigenetic markers in PyMT primary tumors	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED XLSX SRA Run Selector	Margherita Boieri	May 15, 2022
GSE156245	Map3k2-regulated intestinal stromal cells define a distinct intestine stem cell niche for tissue repair	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	21	BED BW MTX RDS TSV XLSX SRA Run Selector	Hongxiang Sun	Aug 15, 2020
GSE156437	YTHDF2/3 are required for somatic reprogramming through different RNA deadenylation pathways	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	84	BED BW XLSX SRA Run Selector	Jiadong Liu	Aug 19, 2020
GSE164360	Epigenomic Activation of Enhancers in Granule Cell Precursors by CHARGE Syndrome Protein CHD7 Regulates Gyrification of the Mammalian Cerebellum	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	104	BED TXT XLSX SRA Run Selector	Naveen Reddy	Apr 07, 2021
GSE169745	Interrogation of H3.3K27me3 in mESC pluripotency and differentiation through ChIP-seq, RNA-seq, and H3.3K27A RNA-seq analysis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	65	BED BW CSV TXT XLS XLSX SRA Run Selector	Peder J Lund	Jan 18, 2022