119 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterPlatform: GPL19057 Remove filterGenome binding/occupancy profiling by high throughput sequencing Remove filterWIG
GSE187007
G4access identifies G-quadruplexes and their associations with open chromatin and imprinting control regions. Nat Genet (2023). https://doi.org/10.1038/s41588-023-01437-4
63 Amal Makrini Apr 14, 2023
GSE73865
Genome-wide map of SIX2 and SIX1 binding in human embryonic kidney cortex
  • Genome binding/occupancy profiling by high throughput sequencing
21 Andrew P McMahon Jan 31, 2016
GSE73867
Nephron endowment
23 Andrew P McMahon Jan 31, 2016
GSE77328
OmoMYC blunts promoter invasion by oncogenic MYC to inhibit gene expression characteristic of MYC-dependent tumors
44 Martin Eilers Oct 18, 2016
GSE80154
Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma
144 James Bradner Jan 29, 2018
GSE84052
RAG1 targeting in the genome is dominated by chromatin interactions mediated by the non-core regions of RAG1 and RAG2
  • Genome binding/occupancy profiling by high throughput sequencing
4 Yaakov Maman Jul 06, 2016
GSE86393
Direct and tissue-specific assessment of the damaging potential of regulatory SNPs
  • Genome binding/occupancy profiling by high throughput sequencing
6 Jim Hughes Jun 15, 2017
GSE86912
Quantitative Proteomic and Transcriptomic Analysis Reveals Post-Transcriptional Regulation of Mitochondrial Biogenesis during Erythropoiesis
32 Jian Xu May 15, 2017
GSE88817
In situ CAPTURE of chromatin interactions by biotinylated dCas9
175 Jian Xu Aug 24, 2017
GSE89416
ATAC-seq analysis in 5F cells and AGM cells with EZH1 depletion
  • Genome binding/occupancy profiling by high throughput sequencing
7 Melissa Kinney Jan 01, 2018
GSE89418
EZH1 as a key epigenetic barrier to definitive haematopoiesis during embryonic development
58 Melissa Kinney Jan 01, 2018
GSE99173
ATAC-seq analysis in K562 cells with or without HBD-1k region knockout, mouse KH2 embryonic stem cells (ESCs) and differentiated KH2 Embryoid bodies (EBs)
  • Genome binding/occupancy profiling by high throughput sequencing
14 Jian Xu Aug 24, 2017
GSE99177
ChIP-seq analysis of dCas9 chromatin occupancy by dCas9/sgRNA-mediated CAPTURE
  • Genome binding/occupancy profiling by high throughput sequencing
61 Jian Xu Aug 24, 2017
GSE99178
ChIP-seq analysis of BRD4 and RNAPII in K562 cells treated with DMSO or JQ1, NUP98 and NUP153 in K562 cells, and H3K27ac in mouse KH2 undifferentiated embryonic stem cells (ESCs) or differentiated embryonic bodies (EBs)
  • Genome binding/occupancy profiling by high throughput sequencing
11 Jian Xu Aug 24, 2017
GSE108639
Simultaneous quantifications of protein-DNA contacts and transcriptomics in single cells
28 Koos Rooijers Apr 21, 2019
GSE139117
Analysis of CRE-mediated chromatin interactions by CAPTURE2.0
105 Jian Xu Feb 20, 2020
GSE155972
Epigenetic Silencing by SETDB1 Suppresses Tumor-cell Intrinsic Immunogenicity
177 Jingyi Wu Mar 18, 2021
GSE156215
Histone H4 lysine 20 mono-methylation directly facilitates chromatin ‘openness’ and promotes transcription of housekeeping genes (ATAC-seq)
  • Genome binding/occupancy profiling by high throughput sequencing
28 Mads Lerdrup Jun 04, 2021
GSE156216
Histone H4 lysine 20 mono-methylation directly facilitates chromatin ‘openness’ and promotes transcription of housekeeping genes (ChIP-seq)
  • Genome binding/occupancy profiling by high throughput sequencing
18 Mads Lerdrup Jun 04, 2021
GSE156217
Histone H4 lysine 20 mono-methylation directly facilitates chromatin ‘openness’ and promotes transcription of housekeeping genes
  • Genome binding/occupancy profiling by high throughput sequencing
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Mads Lerdrup Jun 04, 2021