GEO Browser - GEO

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121 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing			WIG
GSE72720	CTCF binding polarity determines chromatin looping	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	506	BED WIG	Elzo de Wit	Oct 29, 2015
GSE73865	Genome-wide map of SIX2 and SIX1 binding in human embryonic kidney cortex	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	21	BED WIG SRA Run Selector	Andrew P McMahon	Jan 31, 2016
GSE73867	Nephron endowment	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	23	BED TXT WIG	Andrew P McMahon	Jan 31, 2016
GSE81222	Erasure of Tet-oxidized 5-methylcytosine by a SRAP nuclease	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	31	BED BEDGRAPH BIGWIG TXT WIG SRA Run Selector	Douglas Edmund Feldman	Oct 10, 2017
GSE84899	Cdx and T Brachyury co-activate growth signaling in the embryonic axial progenitor niche.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	55	BED BW CSV WIG SRA Run Selector	Jacqueline Deschamps	Dec 20, 2016
GSE86912	Quantitative Proteomic and Transcriptomic Analysis Reveals Post-Transcriptional Regulation of Mitochondrial Biogenesis during Erythropoiesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	32	BED WIG	Jian Xu	May 15, 2017
GSE87623	Vitamin C induced epigenomic remodeling in IDH1 mutant acute myeloid leukemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	24	BED TXT WIG SRA Run Selector	Martin Hirst	Jul 01, 2017
GSE88817	In situ CAPTURE of chromatin interactions by biotinylated dCas9	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	175	BED WIG	Jian Xu	Aug 24, 2017
GSE89416	ATAC-seq analysis in 5F cells and AGM cells with EZH1 depletion	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	7	BED WIG SRA Run Selector	Melissa Kinney	Jan 01, 2018
GSE89418	EZH1 as a key epigenetic barrier to definitive haematopoiesis during embryonic development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	58	BED TXT WIG	Melissa Kinney	Jan 01, 2018
GSE94365	Lkb1 inactivation drives lung cancer lineage switching governed by Polycomb Repressive Complex 2	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED WIG SRA Run Selector	Hideo Watanabe	Feb 02, 2017
GSE97020	Loss of Asxl2 leads to myeloid malignancies in mice. [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED WIG SRA Run Selector	yanling sun	Mar 08, 2018
GSE97022	Loss of Asxl2 leads to myeloid malignancies in mice.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	BED FPKM_TRACKING WIG	yanling sun	Mar 08, 2018
GSE99173	ATAC-seq analysis in K562 cells with or without HBD-1k region knockout, mouse KH2 embryonic stem cells (ESCs) and differentiated KH2 Embryoid bodies (EBs)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	14	BED WIG SRA Run Selector	Jian Xu	Aug 24, 2017
GSE99177	ChIP-seq analysis of dCas9 chromatin occupancy by dCas9/sgRNA-mediated CAPTURE	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	61	BED TXT WIG SRA Run Selector	Jian Xu	Aug 24, 2017
GSE99178	ChIP-seq analysis of BRD4 and RNAPII in K562 cells treated with DMSO or JQ1, NUP98 and NUP153 in K562 cells, and H3K27ac in mouse KH2 undifferentiated embryonic stem cells (ESCs) or differentiated embryonic bodies (EBs)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	11	BED WIG SRA Run Selector	Jian Xu	Aug 24, 2017
GSE100455	H3K9 methyltransferases and demethylases control lung tumor-propagating cells and lung cancer progression	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30	BED WIG SRA Run Selector	Hideo Watanabe	Nov 30, 2018
GSE102148	KDM4B epigenetically protects against obesity and metabolic dysfunction [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BED WIG SRA Run Selector	Cunyu Wang	May 22, 2019
GSE102290	KDM4B epigenetically protects against obesity and metabolic dysfunction	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BED CEL CHP WIG	Cunyu Wang	May 22, 2019
GSE110860	Chromatin accessibility in C. albicans stimulated HoxER-PU.1 WT and HoxER-PU.1 KO neutrophils and DMSO, TSA or Entinostat treated HoxER-PU.1 WT neutrophils	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	13	BED WIG SRA Run Selector	Frank Rosenbauer	Mar 19, 2019