GEO Browser - GEO

Series

Samples

Platforms

DataSets

280 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing			TSV
GSE60605	An alternative pluripotent state confers interspecies chimaeric competency	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	42	BIGWIG CEL TSV	Christopher Benner	May 06, 2015
GSE93431	Two independent modes of chromosome organization are revealed by cohesin removal	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	32	BW CSV HDF5 NARROWPEAK TSV TXT SRA Run Selector	Nezar Abdennur	Jun 10, 2017
GSE109262	Joint profiling of chromatin accessibility, DNA methylation and transcription in single cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus synthetic construct	244	TSV TXT SRA Run Selector	Felix Krueger	Jan 17, 2018
GSE96611	Interplay between genome topology and gene regulation during somatic cell reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	57	BEDGRAPH BW TSV	Thomas Graf	Jan 30, 2018
GSE108077	Warming Induces Significant Reprogramming of Beige, but Not Brown, Adipocyte Cellular Identity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	58	BW TSV SRA Run Selector	Evan Rosen	Mar 01, 2018
GSE99607	Impaired DNA demethylation of C/EBP sites causes premature aging	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array Other	Mus musculus	58	BW TAR TSV TXT	Emil Karaulanov	Jun 11, 2018
GSE111839	Transcriptional and Epigenomic Landscapes of CNS and non-CNS Vascular Endothelial Cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	42	BW MTX NARROWPEAK TAR TSV TXT SRA Run Selector	Mark F Sabbagh	Sep 06, 2018
GSE118794	The Chromatin Reader ZMYND8 Regulates Igh Enhancers to Promote Immunoglobulin Class Switch Recombination	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	44	BIGWIG BW FASTA TSV SRA Run Selector	Thiago Y Oliveira	Oct 04, 2018
GSE111931	Nut is a cell type-specific stimulator of p300 enhancing H4 hyperacetylation during haploid male genome programming	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BW TSV SRA Run Selector	Sophie Rousseaux	Oct 15, 2018
GSE122589	Transcription factor activity and nucleosome organisation in mitosis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	97	BW TSV SRA Run Selector	Pablo Navarro	Dec 04, 2018
GSE111856	Learning the cis sequence elements that determine AP-1 monomer specificity	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	51	BIGWIG TSV	Jenhan Tao	Jan 31, 2019
GSE129675	Critical Role of Jumonji Domain of JMJD1C in MLL-rearranged leukemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	54	BIGWIG MTX TSV TXT	Nan Zhu	Apr 12, 2019
GSE112136	Mammalian ISWI and SWI/SNF selectively mediate binding of distinct groups of transcription factors	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	90	BED MATRIX TSV WIG	Dirk Schuebeler	Apr 18, 2019
GSE108639	Simultaneous quantifications of protein-DNA contacts and transcriptomics in single cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	28	TSV WIG	Koos Rooijers	Apr 21, 2019
GSE123586	Simultaneous quantifications of protein-DNA contacts and transcriptomics in single cells (mESC data)	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	17	TSV WIG SRA Run Selector	Koos Rooijers	Apr 21, 2019
GSE132054	Three-dimensional genomic structure and cohesin occupancy correlates with transcriptional activity during spermatogenesis	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	18	BW TSV TXT SRA Run Selector	Covadonga Vara	Jun 03, 2019
GSE134413	PTPN2 regulates the generation of exhausted CD8+ T cell subpopulations and restrains tumor immunity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	49	MTX TDF TSV	Brian Christopher Miller	Jul 17, 2019
GSE134732	Mitigating antagonism between transcription and proliferation allows near-deterministic cellular reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	42	BW MTX TSV	Kate E Galloway	Jul 24, 2019
GSE124067	Ripk4-Irf6 signaling axis ensures differentiation and barrier function	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	47	TSV TXT	Rohit Reja	Aug 29, 2019
GSE121589	Dissecting the Individual and Collective Regenerative Behavior of Muscle Stem Cells During Aging	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	90	BIGWIG NARROWPEAK TAGALIGN TSV TXT SRA Run Selector	Carlos Aguilar	Aug 30, 2019