GEO Browser - GEO

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334 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing			NARROWPEAK
GSE93431	Two independent modes of chromosome organization are revealed by cohesin removal	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	32	BW CSV HDF5 NARROWPEAK TSV TXT SRA Run Selector	Nezar Abdennur	Jun 10, 2017
GSE151013	Mechanistic dissection of dominant AIRE mutations in mouse models reveals evidence for AIRE auto-regulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	102	BED BROADPEAK NARROWPEAK	Jakub Abramson	Aug 30, 2021
GSE165550	Mechanistic dissection of dominant AIRE mutations in mouse models reveals AIRE auto-regulation [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	NARROWPEAK SRA Run Selector	Jakub Abramson	Sep 01, 2021
GSE192875	Transcriptional regulation of the thymus master regulator Foxn1	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	72	BROADPEAK BW NARROWPEAK	Jakub Abramson	Aug 03, 2022
GSE204741	Transcriptional regulation of the thymus master regulator Foxn1 [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	NARROWPEAK	Jakub Abramson	Aug 03, 2022
GSE121589	Dissecting the Individual and Collective Regenerative Behavior of Muscle Stem Cells During Aging	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	90	BIGWIG NARROWPEAK TAGALIGN TSV TXT SRA Run Selector	Carlos Aguilar	Aug 30, 2019
GSE262348	NEMO Knockout Drives Variations in Gene Expression Regenerative Trajectory and Induces Chromatin Remodeling in murine muscle satellite cells during healing from traumatic injury	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	BIGWIG NARROWPEAK TSV TXT	Carlos Aguilar	Apr 01, 2024
GSE186907	Regulation of CD8+ T cell differentiation by the transcription factor Bcl11b	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	36	BEDGRAPH BW NARROWPEAK	Dorina Avram	Jun 08, 2023
GSE235650	Identification of endothelial gene regulatory elements during cardiopharyngeal lineage differentiation [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	NARROWPEAK	Antonio Baldini	Jan 26, 2024
GSE235651	Identification of endothelial gene regulatory elements during cardiopharyngeal lineage differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	NARROWPEAK	Antonio Baldini	Jan 26, 2024
GSE186695	A molecular switch between mammalian MLL complexes dictates response to Menin-MLL inhibition [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30	BW NARROWPEAK SRA Run Selector	Douglas Barrows	Nov 16, 2022
GSE186711	A molecular switch between mammalian MLL complexes dictates response to Menin-MLL inhibition	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	72	BW NARROWPEAK	Douglas Barrows	Nov 16, 2022
GSE231566	Altered chromatin occupancy of patient-associated H4 mutants misregulate neuronal differentiation [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	36	BW NARROWPEAK	Douglas Barrows	Oct 19, 2023
GSE231567	Altered chromatin occupancy of patient-associated H4 mutants misregulate neuronal differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	45	BW NARROWPEAK	Douglas Barrows	Oct 19, 2023
GSE240029	ATRX guards against aberrant differentiation in mesenchymal progenitor cells (ATAC-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BW NARROWPEAK	Douglas Barrows	Mar 13, 2024
GSE240030	ATRX guards against aberrant differentiation in mesenchymal progenitor cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	165	BED BW NARROWPEAK	Douglas Barrows	Mar 13, 2024
GSE157556	Insights into the regulation of the brain-placental axis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	42	COV NARROWPEAK	Susanta K. Behura	Aug 27, 2021
GSE131775	Open chromatin in Sox2-EGFP-sorted cells of the embryonic mouse cochlear duct	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BW NARROWPEAK SRA Run Selector	Olivia Bermingham-McDonogh	Jun 21, 2019
GSE119792	PAN-INTACT enables isolation of lineage-specific nuclei from fibrous tissues	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BIGWIG NARROWPEAK SRA Run Selector	Samadrita Bhattacharyya	Apr 05, 2019
GSE122713	scRNA-seq, bulk RNA-seq, and ATAC-seq data from progenitor exhausted and terminally exhausted CD8+ T cells from tumors and chronic viral infection	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	72	NARROWPEAK	Kevin Bi	Nov 20, 2018