GEO Browser - GEO

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334 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing			NARROWPEAK
GSE76478	Cell-of-origin specific 3D genome structure acquired during somatic cell reprogramming [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	26	NARROWPEAK SRA Run Selector	Elzo de Wit	Mar 01, 2016
GSE76481	Cell-of-origin specific 3D genome structure acquired during somatic cell reprogramming	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by array	Mus musculus	85	NARROWPEAK TXT	Elzo de Wit	Mar 01, 2016
GSE76927	ChIP-seq analysis of E2f4, H3K4me2 and H3K27ac in the mouse livers	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	BIGWIG BROADPEAK NARROWPEAK SRA Run Selector	Xuxu Sun	Mar 30, 2016
GSE76935	Suppression of SWI/SNF component Arid1a promotes mammalian regeneration through chromatin remodeling	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	26	BIGWIG BROADPEAK NARROWPEAK XLS	Xuxu Sun	Mar 30, 2016
GSE71156	Allele-specific ATAC-seq	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BW NARROWPEAK TXT SRA Run Selector	Howard Chang	Jun 30, 2016
GSE81203	Polarized regulatory landscape and Wnt responsiveness underlie Hox activation in embryos	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	65	BEDGRAPH BW NARROWPEAK WIG SRA Run Selector	Jacqueline Deschamps	Sep 16, 2016
GSE91021	The Sin3a/HDAC co-repressor complex cooperates with Nanog in promoting stem cell pluripotency and somatic cell reprogramming [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	NARROWPEAK SRA Run Selector	Jianlong Wang	Feb 21, 2017
GSE90850	Epithelial-Mesenchymal Micro-Niches Govern Stem Cell Lineage Choices	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1130	NARROWPEAK TXT	Hanseul Yang	Apr 18, 2017
GSE85185	YY1 and CTCF Orchestrate a 3D Chromatin Looping Switch during Early Neural Lineage Commitment	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	16	BED NARROWPEAK TXT SRA Run Selector	Jennifer E Phillips-Cremins	May 22, 2017
GSE93431	Two independent modes of chromosome organization are revealed by cohesin removal	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	32	BW CSV HDF5 NARROWPEAK TSV TXT SRA Run Selector	Nezar Abdennur	Jun 10, 2017
GSE73692	Genome-wide mapping of PRDM15 binding in pluripotent mouse Embryonic Stem Cells (mESCs)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	BED BW NARROWPEAK SRA Run Selector	Jingxian Zhang	Jul 24, 2017
GSE73694	PRDM15 safeguards naïve pluripotency by transcriptionally regulating WNT and MAPK/ERK signaling	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	29	BW NARROWPEAK	Jingxian Zhang	Jul 24, 2017
GSE95530	Arid1a promotes tumor initiation but restrains progression and metastasis in liver cancer [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BW NARROWPEAK SRA Run Selector	Xuxu Sun	Dec 13, 2017
GSE95541	Arid1a promotes tumor initiation but restrains progression and metastasis in liver cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	62	BW NARROWPEAK	Xuxu Sun	Dec 13, 2017
GSE102607	Arid1a promotes tumor initiation but restrains progression and metastasis in liver cancer [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	18	BW NARROWPEAK SRA Run Selector	Xuxu Sun	Dec 13, 2017
GSE75188	Ezh2 and Runx1 Mutations Targeted to Early Lymphoid Progenitors Collaborate to Promote Early Thymic Progenitor Leukemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	29	BROADPEAK NARROWPEAK	Adam Mead	Feb 12, 2018
GSE98119	The energetics and physiological impact of cohesin extrusion	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	352	BED BEDGRAPH BW HIC NARROWPEAK TXT SRA Run Selector	Seolkyoung Jung	May 01, 2018
GSE112230	LSD1 ablation stimulates anti-tumor immunity and enables checkpoint blockade	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	29	BW CSV NARROWPEAK SRA Run Selector	Wanqiang Sheng	Jun 21, 2018
GSE111839	Transcriptional and Epigenomic Landscapes of CNS and non-CNS Vascular Endothelial Cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	42	BW MTX NARROWPEAK TAR TSV TXT SRA Run Selector	Mark F Sabbagh	Sep 06, 2018
GSE122713	scRNA-seq, bulk RNA-seq, and ATAC-seq data from progenitor exhausted and terminally exhausted CD8+ T cells from tumors and chronic viral infection	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	72	NARROWPEAK	Kevin Bi	Nov 20, 2018