GEO Browser - GEO

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160 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing			CSV
GSE199186	ATAC-seq chromatin accessibility profiling in pancreatic islets isolated from Arid1aFl/Fl ; MIP-rtTA control and Arid1aFl/Fl; MIP-rtTA; TRE-Cre mice (Arid1a βKO) with/without pancreatectomy.	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	15	CSV	Hao Zhu	Mar 22, 2022
GSE201003	ATAC-seq chromatin accessibility profiling in pancreatic islets isolated from Arid1aFl/Fl ; MIP-rtTA control and Arid1aFl/Fl; MIP-rtTA; TRE-Cre mice (Arid1a βKO) with/without pancreatectomy	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	15	CSV	Hao Zhu	Apr 21, 2022
GSE138528	Long-range Pitx2c Enhancer Promoter Interactions Prevent Predisposition to Atrial Fibrillation [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	CSV SRA Run Selector	Min Zhang	Oct 08, 2019
GSE132266	scChIC-seq reveals focusing of global chromatin domains during differentiation	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	80	CSV TXT SRA Run Selector	Jake Yeung	May 10, 2024
GSE157446	Single cell dual-omics reveals the transcriptomic and epigenomic diversity of cardiac non-myocytes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	CSV	Yuchen Yang	Apr 21, 2021
GSE197194	Epigenetic regulation of cardiac maturation by arginine methyltransferase Carm1 (ATAC-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	CSV	Yuchen Yang	Dec 26, 2023
GSE179043	Transcriptional programs dictating Schwann cell transformation in MPNST	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	50	CSV H5 TAR TBI TSV TXT	Lai Man (Natalie) Wu	Nov 07, 2022
GSE155972	Epigenetic Silencing by SETDB1 Suppresses Tumor-cell Intrinsic Immunogenicity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	177	CSV H5 TXT WIG SRA Run Selector	Jingyi Wu	Mar 18, 2021
GSE225801	Tissue-resident, extravascular Ly6c- monocytes are critical for inflammation in the synovium Figure 3 & 7	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	9	CSV H5	Deborah R Winter	Aug 15, 2023
GSE130119	MAFG-driven astrocytes promote CNS inflammation	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	163	BEDGRAPH CSV TXT	Michael Wheeler	Feb 12, 2020
GSE214675	NF-kB and Circadian Enhancers Link β-cell Function with Anti-IL1B Therapy [scATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	8	CSV H5 RDS TSV	Benjamin J Weidemann	Apr 03, 2023
GSE214676	NF-kB and Circadian Enhancers Link β-cell Function with Anti-IL1B Therapy [Bulk ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	36	CSV TXT	Benjamin J Weidemann	Apr 03, 2023
GSE214678	NF-kB and Circadian Enhancers Link β-cell Function with Anti-IL1B Therapy.	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	108	BW CSV TXT	Benjamin J Weidemann	Apr 03, 2023
GSE142365	Single cell ATAC-seq of cardiomyocytes from neonatal mouse hearts after injury	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED CSV H5 MTX TBI TSV SRA Run Selector	Zhaoning Wang	Mar 18, 2020
GSE142366	Dynamic transcriptional responses to injury of regenerative and non-regenerative cardiomyocytes revealed by single-nucleus RNA sequencing	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	18	BED CSV H5 MTX TBI TSV	Zhaoning Wang	Mar 18, 2020
GSE153479	Single cell ATAC-seq of neonatal heart regeneration	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BED CSV H5 MTX TBI TSV TXT SRA Run Selector	Zhaoning Wang	Dec 08, 2020
GSE112417	Histone Variant H2A.Z Defines Cell Identity in Vascular Smooth Muscle Cells as Revealed by Single-Cell Transcriptomics	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	52	BIGWIG CSV TXT SRA Run Selector	Li Wang	Jun 08, 2018
GSE122706	Single cell analysis of murine fibroblasts identifies neonatal to adult switching that regulates cardiomyocyte maturation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	CSV SRA Run Selector	Li Wang	Apr 20, 2020
GSE240182	INO80 and heart failure.	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	39	BW CSV TXT	li wang	Jan 04, 2024
GSE136451	WDR5 is a conserved regulator of protein synthesis gene expression	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	65	CSV NARROWPEAK TXT SRA Run Selector	Jing Wang	Jan 17, 2020