GEO Browser - GEO

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161 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing			CSV
GSE66364	PML protein organizes heterochromatin domains where it regulates histone H3.3 deposition by ATRX/DAXX	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	20	BED BW CSV SRA Run Selector	Philippe Collas	Mar 06, 2017
GSE72084	Characterization of chromatin and gene expression changes during fasting in mouse liver [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	38	BEDGRAPH CSV SRA Run Selector	Songjoon Baek	Dec 20, 2016
GSE72087	Characterization of chromatin and gene expression changes during fasting in mouse liver	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	50	BEDGRAPH CSV FPKM_TRACKING	Songjoon Baek	Dec 20, 2016
GSE84899	Cdx and T Brachyury co-activate growth signaling in the embryonic axial progenitor niche.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	55	BED BW CSV WIG SRA Run Selector	Jacqueline Deschamps	Dec 20, 2016
GSE89960	An environment-dependent transcriptional network regulates human microglia phenotypes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	41	BED CSV SRA Run Selector	Dylan Derik Skola	May 25, 2017
GSE92426	MAP3K4 Kinase Activity Controls Chromatin Remodelers for Transitions Between Epithelial and Mesenchymal Phenotypes in Trophoblast Stem Cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	CSV WIG	Amy Abell	Mar 07, 2017
GSE93431	Two independent modes of chromosome organization are revealed by cohesin removal	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	32	BW CSV HDF5 NARROWPEAK TSV TXT SRA Run Selector	Nezar Abdennur	Jun 10, 2017
GSE93755	Constrained pioneering and partner factor redirection by PU.1 shape early T-cell gene regulation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	188	CSV TXT SRA Run Selector	Ellen Rothenberg	Jun 21, 2018
GSE94351	Mutations in linker-2 of KLF1 impair expression of membrane transporters and cytoskeletal proteins causing hemolysis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	13	CSV DIFF XLSX SRA Run Selector	Stephen Huang	Jul 03, 2024
GSE98063	Mll3 and Mll4 facilitate enhancer RNA synthesis and transcriptional elongation from promoters independently of H3K4 monomethylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	48	BEDGRAPH BW CSV SRA Run Selector	Kristel Dorighi	May 05, 2017
GSE99475	H3K27 Acetylation profile of hypothyroid NCoR1KO mice	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	CSV SRA Run Selector	arturo mendoza	Sep 18, 2017
GSE104850	Interrogating the functions of PRDM9 domains in meiosis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	28	BED BIGWIG CSV SRA Run Selector	Galina Petukhova	Apr 27, 2018
GSE107154	Decoding the regulatory circuit by epigenetic regulator MOF in haematopoiesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	68	BED BIGWIG CSV TXT	Asifa Akhtar	Mar 13, 2020
GSE108620	β-catenin associated protein complex maintains ground state mouse embryonic stem cell by regulating lineage development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	50	BW CSV SRA Run Selector	Shiyuan (Cynthia) Chen	Aug 20, 2020
GSE108948	Fine Resolution Mapping of TF binding and Chromatin Interactions	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Saccharomyces cerevisiae	12	BW CSV SRA Run Selector	Nir Friedman	Mar 06, 2018
GSE111144	ATAC-Seq of CD8+ T cells during activaion in vitro over the course 24 hours with and without Runx3	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	CSV SRA Run Selector	Adam Getzler	Apr 19, 2018
GSE111149	Runx3 pioneers chromatin accessibility of cis-regulatory landscapes that drive memory CTL formation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	54	CSV	Adam Getzler	Apr 19, 2018
GSE112222	BAZ2A safeguards genome architecture of ground-state pluripotent stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	49	BED BW CSV HIC SRA Run Selector	Raffaella Santoro	Oct 20, 2020
GSE112230	LSD1 ablation stimulates anti-tumor immunity and enables checkpoint blockade	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	29	BW CSV NARROWPEAK SRA Run Selector	Wanqiang Sheng	Jun 21, 2018
GSE112417	Histone Variant H2A.Z Defines Cell Identity in Vascular Smooth Muscle Cells as Revealed by Single-Cell Transcriptomics	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	52	BIGWIG CSV TXT SRA Run Selector	Li Wang	Jun 08, 2018